def it_can_generate_random_coordinates(self, request, tmpdir):
tmp_path_ = tmpdir.mkdir("myslide")
image = PILImageMock.DIMS_500X500_RGBA_COLOR_155_249_240
image.save(os.path.join(tmp_path_, "mywsi.png"), "PNG")
slide_path = os.path.join(tmp_path_, "mywsi.png")
slide = Slide(slide_path, "processed")
_box_mask_lvl = method_mock(request, RandomTiler, "box_mask_lvl")
_box_mask_lvl.return_value = SparseArrayMock.ONES_500X500_BOOL
_tile_size = property_mock(request, RandomTiler, "tile_size")
_tile_size.return_value = (128, 128)
_np_random_choice1 = function_mock(request, "numpy.random.choice")
_np_random_choice1.return_value = 0
_np_random_choice2 = function_mock(request, "numpy.random.choice")
_np_random_choice2.return_value = 0
_scale_coordinates = function_mock(request,
"histolab.tiler.scale_coordinates")
random_tiler = RandomTiler((128, 128), 10, 0)
random_tiler._random_tile_coordinates(slide)
_box_mask_lvl.assert_called_once_with(random_tiler, slide)
_tile_size.assert_has_calls([call((128, 128))])
_scale_coordinates.assert_called_once_with(
reference_coords=CoordinatePair(x_ul=0, y_ul=0, x_br=128,
y_br=128),
reference_size=(500, 500),
target_size=(500, 500),
)
def it_can_generate_random_coordinates(self, request, tmpdir):
slide, _ = base_test_slide(tmpdir,
PILIMG.RGBA_COLOR_500X500_155_249_240)
_box_mask_thumb = method_mock(request, BiggestTissueBoxMask,
"__call__")
_box_mask_thumb.return_value = NpArrayMock.ONES_500X500_BOOL
_tile_size = property_mock(request, RandomTiler, "tile_size")
_tile_size.return_value = (128, 128)
_random_choice_true_mask2d = function_mock(
request, "histolab.tiler.random_choice_true_mask2d")
_random_choice_true_mask2d.return_value = (0, 0)
_scale_coordinates = function_mock(request,
"histolab.tiler.scale_coordinates")
random_tiler = RandomTiler((128, 128), 10, 0)
binary_mask = BiggestTissueBoxMask()
random_tiler._random_tile_coordinates(slide, binary_mask)
_box_mask_thumb.assert_called_once_with(binary_mask, slide)
_tile_size.assert_has_calls([call((128, 128))])
_random_choice_true_mask2d.assert_called_once_with(
NpArrayMock.ONES_500X500_BOOL)
_scale_coordinates.assert_called_once_with(
reference_coords=CP(x_ul=0, y_ul=0, x_br=128, y_br=128),
reference_size=(500, 500),
target_size=(500, 500),
)
def it_can_generate_random_coordinates(self, request, tmpdir):
slide, _ = base_test_slide(tmpdir,
PILIMG.RGBA_COLOR_500X500_155_249_240)
_box_mask_thumb = method_mock(request, RandomTiler, "box_mask")
_box_mask_thumb.return_value = NpArrayMock.ONES_500X500_BOOL
_tile_size = property_mock(request, RandomTiler, "tile_size")
_tile_size.return_value = (128, 128)
_np_random_choice1 = function_mock(request, "numpy.random.choice")
_np_random_choice1.return_value = 0
_np_random_choice2 = function_mock(request, "numpy.random.choice")
_np_random_choice2.return_value = 0
_scale_coordinates = function_mock(request,
"histolab.tiler.scale_coordinates")
random_tiler = RandomTiler((128, 128), 10, 0)
random_tiler._random_tile_coordinates(slide)
_box_mask_thumb.assert_called_once_with(slide)
_tile_size.assert_has_calls([call((128, 128))])
_scale_coordinates.assert_called_once_with(
reference_coords=CP(x_ul=0, y_ul=0, x_br=128, y_br=128),
reference_size=(500, 500),
target_size=(500, 500),
)