def prepare_argument_path(
self, argument_noun, raw_arguments, draft_folder, default_path):
data_type = get_data_type(argument_noun)
# If client sent direct content (x_table_csv), save it
for file_format in data_type.formats:
raw_argument_name = '%s_%s' % (argument_noun, file_format)
if raw_argument_name not in raw_arguments:
continue
source_text = raw_arguments[raw_argument_name]
target_name = '%s.%s' % (argument_noun, file_format)
return copy_text(join(draft_folder, target_name), source_text)
# Raise KeyError if client did not specify noun (x_table)
v = raw_arguments[argument_noun]
# If client sent multipart content, save it
if hasattr(v, 'file'):
target_name = argument_noun + get_file_extension(v.filename)
return copy_file(join(draft_folder, target_name), v.file)
# If client sent empty content, use default
if v == '':
if not default_path:
raise KeyError
target_name = argument_noun + get_file_extension(default_path)
return link_path(join(draft_folder, target_name), default_path)
# If client sent a relative path (x_table=11/x/y.csv), find it
if '/' in v:
source_path = self.get_file_path(*parse_result_relative_path(v))
target_name = argument_noun + get_file_extension(source_path)
return link_path(join(draft_folder, target_name), source_path)
# If client sent an upload id (x_table=x), find it
upload = get_upload(self, upload_id=v)
source_path = join(upload.folder, data_type.get_file_name())
target_name = argument_noun + get_file_extension(source_path)
target_path = move_path(join(draft_folder, target_name), source_path)
remove_safely(upload.folder)
return target_path
def run(self, args):
settings = get_appsettings(args.configuration_path)
if args.restart and 'data.folder' in settings:
remove_safely(settings['data.folder'])
for key, value in settings.items():
if key.endswith('.folder'):
make_folder(value)
def prepare_argument_path(self, argument_noun, raw_arguments, draft_folder,
default_path):
data_type = get_data_type(argument_noun)
# If client sent direct content (x_table_csv), save it
for file_format in data_type.formats:
raw_argument_name = '%s_%s' % (argument_noun, file_format)
if raw_argument_name not in raw_arguments:
continue
source_text = raw_arguments[raw_argument_name]
target_name = '%s.%s' % (argument_noun, file_format)
return copy_text(join(draft_folder, target_name), source_text)
# Raise KeyError if client did not specify noun (x_table)
v = raw_arguments[argument_noun]
# If client sent multipart content, save it
if hasattr(v, 'file'):
target_name = argument_noun + get_file_extension(v.filename)
return copy_file(join(draft_folder, target_name), v.file)
# If client sent empty content, use default
if v == '':
if not default_path:
raise KeyError
target_name = argument_noun + get_file_extension(default_path)
return link_path(join(draft_folder, target_name), default_path)
# If client sent a relative path (x_table=11/x/y.csv), find it
if '/' in v:
source_path = self.get_file_path(*parse_result_relative_path(v))
target_name = argument_noun + get_file_extension(source_path)
return link_path(join(draft_folder, target_name), source_path)
# If client sent an upload id (x_table=x), find it
upload = get_upload(self, upload_id=v)
source_path = realpath(join(upload.folder, data_type.get_file_name()))
target_name = argument_noun + get_file_extension(source_path)
target_path = move_path(join(draft_folder, target_name), source_path)
remove_safely(upload.folder)
return target_path
def prepare_arguments(self, tool_definition, raw_arguments):
draft_folder = make_unique_folder(join(
self.data_folder, 'drafts', Result._plural), length=16)
try:
result_arguments = self.collect_arguments(
tool_definition, raw_arguments, draft_folder)
except DataParseError as e:
raise HTTPBadRequest(e.message_by_name)
result = self.spawn_result()
result.arguments = self.migrate_arguments(
result_arguments, result.get_source_folder(self.data_folder))
remove_safely(draft_folder)
return result
def prepare_arguments(self, tool_definition, raw_arguments):
draft_folder = make_unique_folder(join(self.data_folder, 'drafts',
Result._plural),
length=16)
try:
result_arguments = self.collect_arguments(tool_definition,
raw_arguments,
draft_folder)
except DataParseError as e:
raise HTTPBadRequest(e.message_by_name)
result = self.spawn_result()
result.arguments = corral_arguments(
result.get_source_folder(self.data_folder), result_arguments,
move_path)
remove_safely(draft_folder)
return result
def data_folder(tmpdir):
data_folder = str(tmpdir)
yield data_folder
remove_safely(data_folder)
def wash_total_folder(target_folder):
drafts_folder = join(target_folder, 'drafts')
remove_safely(drafts_folder)
remove_safely(drafts_folder + '.prj')
