def test_CreateMatrix_inputs():
input_map = dict(count_region_intersections=dict(usedefault=True,
),
out_endpoint_array_name=dict(genfile=True,
),
out_fiber_length_std_matrix_mat_file=dict(genfile=True,
),
out_intersection_matrix_mat_file=dict(genfile=True,
),
out_matrix_file=dict(genfile=True,
),
out_matrix_mat_file=dict(usedefault=True,
),
out_mean_fiber_length_matrix_mat_file=dict(genfile=True,
),
out_median_fiber_length_matrix_mat_file=dict(genfile=True,
),
resolution_network_file=dict(mandatory=True,
),
roi_file=dict(mandatory=True,
),
tract_file=dict(mandatory=True,
),
)
inputs = CreateMatrix.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
def test_CreateMatrix_outputs():
output_map = dict(endpoint_file=dict(),
endpoint_file_mm=dict(),
fiber_label_file=dict(),
fiber_labels_noorphans=dict(),
fiber_length_file=dict(),
fiber_length_std_matrix_mat_file=dict(),
filtered_tractographies=dict(),
filtered_tractography=dict(),
filtered_tractography_by_intersections=dict(),
intersection_matrix_file=dict(),
intersection_matrix_mat_file=dict(),
matlab_matrix_files=dict(),
matrix_file=dict(),
matrix_files=dict(),
matrix_mat_file=dict(),
mean_fiber_length_matrix_mat_file=dict(),
median_fiber_length_matrix_mat_file=dict(),
stats_file=dict(),
)
outputs = CreateMatrix.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_CreateMatrix_outputs():
output_map = dict(
endpoint_file=dict(),
endpoint_file_mm=dict(),
fiber_label_file=dict(),
fiber_labels_noorphans=dict(),
fiber_length_file=dict(),
fiber_length_std_matrix_mat_file=dict(),
filtered_tractographies=dict(),
filtered_tractography=dict(),
filtered_tractography_by_intersections=dict(),
intersection_matrix_file=dict(),
intersection_matrix_mat_file=dict(),
matlab_matrix_files=dict(),
matrix_file=dict(),
matrix_files=dict(),
matrix_mat_file=dict(),
mean_fiber_length_matrix_mat_file=dict(),
median_fiber_length_matrix_mat_file=dict(),
stats_file=dict(),
)
outputs = CreateMatrix.output_spec()
for key, metadata in output_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(outputs.traits()[key], metakey), value
def test_CreateMatrix_inputs():
input_map = dict(
count_region_intersections=dict(usedefault=True, ),
out_endpoint_array_name=dict(genfile=True, ),
out_fiber_length_std_matrix_mat_file=dict(genfile=True, ),
out_intersection_matrix_mat_file=dict(genfile=True, ),
out_matrix_file=dict(genfile=True, ),
out_matrix_mat_file=dict(usedefault=True, ),
out_mean_fiber_length_matrix_mat_file=dict(genfile=True, ),
out_median_fiber_length_matrix_mat_file=dict(genfile=True, ),
resolution_network_file=dict(mandatory=True, ),
roi_file=dict(mandatory=True, ),
tract_file=dict(mandatory=True, ),
)
inputs = CreateMatrix.input_spec()
for key, metadata in input_map.items():
for metakey, value in metadata.items():
yield assert_equal, getattr(inputs.traits()[key], metakey), value
