def test_upgrade(self):
meas, upgraded, no_upgrade = pmag.convert_directory_2_to_3(input_dir=PROJECT_WD,
output_dir=PROJECT_WD)
expect_out = ['measurements.txt', 'specimens.txt', 'samples.txt',
'sites.txt', 'locations.txt', 'criteria.txt', 'ages.txt']
self.assertEqual(sorted(expect_out), sorted(upgraded))
expect_not_out = ['pmag_results.txt',
'rmag_hysteresis.txt', 'rmag_anisotropy.txt',
'rmag_results.txt', 'er_images.txt']
self.assertEqual(sorted(expect_not_out), sorted(no_upgrade))
def test_upgrade(self):
meas, upgraded, no_upgrade = pmag.convert_directory_2_to_3(input_dir=PROJECT_WD,
output_dir=PROJECT_WD)
expect_out = ['measurements.txt', 'specimens.txt', 'samples.txt',
'sites.txt', 'locations.txt', 'criteria.txt', 'ages.txt']
self.assertEqual(sorted(expect_out), sorted(upgraded))
expect_not_out = ['pmag_results.txt',
'rmag_hysteresis.txt', 'rmag_anisotropy.txt',
'rmag_results.txt', 'er_images.txt']
self.assertEqual(sorted(expect_not_out), sorted(no_upgrade))
def on_convert_3(self, event):
dia = pw.UpgradeDialog(None)
dia.Center()
res = dia.ShowModal()
if res == wx.ID_CANCEL:
webbrowser.open("https://www2.earthref.org/MagIC/upgrade", new=2)
return
## more nicely styled way, but doesn't link to earthref
#msg = "This tool is meant for relatively simple upgrades (for instance, a measurement file, a sample file, and a criteria file).\nIf you have a more complex contribution to upgrade, and you want maximum accuracy, use the upgrade tool at https://www2.earthref.org/MagIC/upgrade.\n\nDo you want to continue?"
#result = pw.warning_with_override(msg)
#if result == wx.ID_NO:
#webbrowser.open("https://www2.earthref.org/MagIC/upgrade", new=2)
#return
# turn files from 2.5 --> 3.0 (rough translation)
meas, upgraded, no_upgrade = pmag.convert_directory_2_to_3('magic_measurements.txt',
input_dir=self.WD, output_dir=self.WD,
data_model=self.contribution.data_model)
if not meas:
wx.MessageBox('2.5 --> 3.0 failed. Do you have a magic_measurements.txt file in your working directory?',
'Info', wx.OK | wx.ICON_INFORMATION)
return
# create a contribution
self.contribution = nb.Contribution(self.WD)
# make skeleton files with specimen, sample, site, location data
self.contribution.propagate_measurement_info()
#
# note what DIDN'T upgrade
#no_upgrade = []
#for fname in os.listdir(self.WD):
# if 'rmag' in fname:
# no_upgrade.append(fname)
# elif fname in ['pmag_results.txt', 'pmag_criteria.txt',
# 'er_synthetics.txt', 'er_images.txt',
# 'er_plots.txt', 'er_ages.txt']:
# no_upgrade.append(fname)
# pop up
upgraded_string = ", ".join(upgraded)
if no_upgrade:
no_upgrade_string = ", ".join(no_upgrade)
msg = '2.5 --> 3.0 translation completed!\n\nThese 3.0 format files were created: {}.\n\nHowever, these 2.5 format files could not be upgraded: {}.\n\nTo convert all 2.5 files, use the MagIC upgrade tool: https://www2.earthref.org/MagIC/upgrade\n'.format(upgraded_string, no_upgrade_string)
if 'criteria.txt' in upgraded:
msg += '\nNote: Please check your criteria file for completeness and accuracy, as not all 2.5 files will be fully upgraded.'
if 'pmag_criteria.txt' in no_upgrade:
msg += '\nNote: Not all criteria files can be upgraded, even on the MagIC site. You may need to recreate an old pmag_criteria file from scratch in Thellier GUI or Demag GUI.'
wx.MessageBox(msg, 'Warning', wx.OK | wx.ICON_INFORMATION)
else:
msg = '2.5 --> 3.0 translation completed!\nThese files were converted: {}'.format(upgraded_string)
wx.MessageBox(msg, 'Info', wx.OK | wx.ICON_INFORMATION)
def on_convert_3(self, event):
dia = pw.UpgradeDialog(None)
dia.Center()
res = dia.ShowModal()
if res == wx.ID_CANCEL:
webbrowser.open("https://www2.earthref.org/MagIC/upgrade", new=2)
return
## more nicely styled way, but doesn't link to earthref
#msg = "This tool is meant for relatively simple upgrades (for instance, a measurement file, a sample file, and a criteria file).\nIf you have a more complex contribution to upgrade, and you want maximum accuracy, use the upgrade tool at https://www2.earthref.org/MagIC/upgrade.\n\nDo you want to continue?"
#result = pw.warning_with_override(msg)
#if result == wx.ID_NO:
#webbrowser.open("https://www2.earthref.org/MagIC/upgrade", new=2)
#return
# turn files from 2.5 --> 3.0 (rough translation)
meas, upgraded, no_upgrade = pmag.convert_directory_2_to_3('magic_measurements.txt',
input_dir=self.WD, output_dir=self.WD,
data_model=self.contribution.data_model)
if not meas:
wx.MessageBox('2.5 --> 3.0 failed. Do you have a magic_measurements.txt file in your working directory?',
'Info', wx.OK | wx.ICON_INFORMATION)
return
# create a contribution
self.contribution = nb.Contribution(self.WD)
# make skeleton files with specimen, sample, site, location data
self.contribution.propagate_measurement_info()
#
# note what DIDN'T upgrade
#no_upgrade = []
#for fname in os.listdir(self.WD):
# if 'rmag' in fname:
# no_upgrade.append(fname)
# elif fname in ['pmag_results.txt', 'pmag_criteria.txt',
# 'er_synthetics.txt', 'er_images.txt',
# 'er_plots.txt', 'er_ages.txt']:
# no_upgrade.append(fname)
# pop up
upgraded_string = ", ".join(upgraded)
if no_upgrade:
no_upgrade_string = ", ".join(no_upgrade)
msg = '2.5 --> 3.0 translation completed!\n\nThese 3.0 format files were created: {}.\n\nHowever, these 2.5 format files could not be upgraded: {}.\n\nTo convert all 2.5 files, use the MagIC upgrade tool: https://www2.earthref.org/MagIC/upgrade\n'.format(upgraded_string, no_upgrade_string)
if 'criteria.txt' in upgraded:
msg += '\nNote: Please check your criteria file for completeness and accuracy, as not all 2.5 files will be fully upgraded.'
if 'pmag_criteria.txt' in no_upgrade:
msg += '\nNote: Not all criteria files can be upgraded, even on the MagIC site. You may need to recreate an old pmag_criteria file from scratch in Thellier GUI or Demag GUI.'
wx.MessageBox(msg, 'Warning', wx.OK | wx.ICON_INFORMATION)
else:
msg = '2.5 --> 3.0 translation completed!\nThese files were converted: {}'.format(upgraded_string)
wx.MessageBox(msg, 'Info', wx.OK | wx.ICON_INFORMATION)
def on_convert_3(self, event):
# turn files from 2.5 --> 3.0 (rough translation)
res = pmag.convert_directory_2_to_3('magic_measurements.txt',
input_dir=self.WD, output_dir=self.WD)
if not res:
wx.MessageBox('2.5 --> 3.0 failed. Do you have a magic_measurements.txt file in your working directory?',
'Info', wx.OK | wx.ICON_INFORMATION)
return
# create a contribution
self.contribution = nb.Contribution(self.WD)
# make skeleton files with specimen, sample, site, location data
self.contribution.propagate_measurement_info()
# pop up
wx.MessageBox('2.5 --> 3.0 translation completed!', 'Info',
wx.OK | wx.ICON_INFORMATION)
def on_convert_3(self, event):
# turn files from 2.5 --> 3.0 (rough translation)
res = pmag.convert_directory_2_to_3('magic_measurements.txt',
input_dir=self.WD,
output_dir=self.WD)
if not res:
wx.MessageBox(
'2.5 --> 3.0 failed. Do you have a magic_measurements.txt file in your working directory?',
'Info', wx.OK | wx.ICON_INFORMATION)
return
# create a contribution
self.contribution = nb.Contribution(self.WD)
# make skeleton files with specimen, sample, site, location data
self.contribution.propagate_measurement_info()
# pop up
wx.MessageBox('2.5 --> 3.0 translation completed!', 'Info',
wx.OK | wx.ICON_INFORMATION)
def on_convert_3(self, event):
# turn files from 2.5 --> 3.0 (rough translation)
meas, upgraded, no_upgrade = pmag.convert_directory_2_to_3(
'magic_measurements.txt',
input_dir=self.WD,
output_dir=self.WD,
data_model=self.contribution.data_model)
if not meas:
wx.MessageBox(
'2.5 --> 3.0 failed. Do you have a magic_measurements.txt file in your working directory?',
'Info', wx.OK | wx.ICON_INFORMATION)
return
# create a contribution
self.contribution = nb.Contribution(self.WD)
# make skeleton files with specimen, sample, site, location data
self.contribution.propagate_measurement_info()
#
# note what DIDN'T upgrade
#no_upgrade = []
#for fname in os.listdir(self.WD):
# if 'rmag' in fname:
# no_upgrade.append(fname)
# elif fname in ['pmag_results.txt', 'pmag_criteria.txt',
# 'er_synthetics.txt', 'er_images.txt',
# 'er_plots.txt', 'er_ages.txt']:
# no_upgrade.append(fname)
# pop up
upgraded_string = ", ".join(upgraded)
if no_upgrade:
no_upgrade_string = ", ".join(no_upgrade)
msg = '2.5 --> 3.0 translation completed!\n\nThese 3.0 format files were created: {}.\n\nHowever, these 2.5 format files could not be upgraded: {}.\n\nTo convert all 2.5 files, use the MagIC upgrade tool: https://www2.earthref.org/MagIC/upgrade\n'.format(
upgraded_string, no_upgrade_string)
if 'criteria.txt' in upgraded:
msg += '\nNote: Please check your criteria file for completeness and accuracy, as not all 2.5 files will be fully upgraded.'
if 'pmag_criteria.txt' in no_upgrade:
msg += '\nNote: Not all criteria files can be upgraded, even on the MagIC site. You may need to recreate an old pmag_criteria file from scratch in Thellier GUI or Demag GUI.'
wx.MessageBox(msg, 'Warning', wx.OK | wx.ICON_INFORMATION)
else:
msg = '2.5 --> 3.0 translation completed!\nThese files were converted: {}'.format(
upgraded_string)
wx.MessageBox(msg, 'Info', wx.OK | wx.ICON_INFORMATION)
def on_convert_3(self, event):
pmag.convert_directory_2_to_3('magic_measurements.txt',
input_dir=self.WD, output_dir=self.WD)
self.contribution = nb.Contribution(self.WD)
self.contribution.propagate_measurement_info()
