Python EMProtocol Examples

Example #1

File: dataimport.py Project: denisfortun/scipion

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     # We need to trace the changes of 'inputType' to 
     # dynamically modify the property of pointerClass
     # of the 'inputSets' parameter
     def onChangeInputType():
         inputText = self.getEnumText('inputType')
         pointerClass = 'SetOf' + inputText
         self.getParam('inputSet').setPointerClass(pointerClass)
     
     self.inputType.trace(onChangeInputType)    

Example #2

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     # We need to trace the changes of 'inputType' to 
     # dynamically modify the property of pointerClass
     # of the 'inputSets' parameter
     def onChangeInputType():
         inputText = self.getEnumText('inputType')
         pointerClass = 'SetOf' + inputText
         self.getParam('inputSet').setPointerClass(pointerClass)
     
     self.inputType.trace(onChangeInputType)    

Example #3

File: protocol_base.py Project: EyeSeeTea/scipion-web

 def __init__(self, **args):
     EMProtocol.__init__(self, **args)

Example #4

File: prot_empiar_submission.py Project: yaizar/scipion_empiar_depositor

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     self.workflowDicts = []
     self.entryAuthorStr = ""
     self.workflowPath = String()
     self.depositionJsonPath = String()

Example #5

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     self.stepsExecutionMode = STEPS_PARALLEL
     self.isFirstTime = Boolean(False)

Example #6

 def __init__(self, **args):
     EMProtocol.__init__(self, **args)
     self.stepsExecutionMode = em.STEPS_PARALLEL

Example #7

File: protocol_base.py Project: juannavascalvente/scipion

 def __init__(self, **args):        
     EMProtocol.__init__(self, **args)

Example #8

File: protocol_gctf_refine.py Project: I2PC/scipion

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     self.allowMpi = False
     self.allowThreads = False
     self._params = {}
     self.stepsExecutionMode = STEPS_PARALLEL

Example #9

File: protocol_micrographs.py Project: josegutab/scipion

 def __init__(self, **args):
     EMProtocol.__init__(self, **args)
     self.stepsExecutionMode = STEPS_PARALLEL
     self.isFirstTime = Boolean(False)

Example #10

 def __init__(self, **kwargs):
     EMProtocol.__init__(self, **kwargs)
     self.allowMpi = False
     self.allowThreads = False
     self._params = {}
     self.stepsExecutionMode = STEPS_PARALLEL