def postprocessLabelitPP(self, iteration):
"""
convert pdf's and copy to working dir.
"""
if self.verbose:
self.logger.debug('LabelitPP::postprocessPP')
try:
pdf = '%s.pdf' % iteration
jpg = pdf.replace('pdf', 'jpg')
if os.path.exists(pdf):
Utils.convertImage(self, pdf, jpg)
if os.path.exists(os.path.join(self.working_dir, jpg)):
os.system('rm -rf %s' %
os.path.join(self.working_dir, jpg))
shutil.copy(jpg, self.working_dir)
#Look for errors if pdf not generated
else:
if os.path.exists('%s.log' % iteration):
data = Parse.ParseOutputLabelitPP(
self,
open('%s.log' % iteration, 'r').readlines())
if data != None:
self.total = data
return ('kill')
except:
self.logger.exception('**ERROR in LabelitPP.postprocessPP**')
def postprocessMolrep(self):
"""
Sort Molrep data.
"""
if self.verbose:
self.logger.debug('AutoStats::postprocessMolrep')
try:
if os.path.exists('molrep_rf.ps'):
Utils.convertImage(self,'molrep_rf.ps','molrep_rf.jpg')
#self.molrep_log = open('molrep.doc','r').readlines()
#data = Parse.ParseOutputMolrep(self,self.molrep_log)
data = Parse.ParseOutputMolrep(self,open('molrep.doc','r').readlines())
else:
data = Parse.setMolrepFailed(self)
self.failed = True
self.clean = False
data.update({'Molrep log':os.path.join(os.getcwd(),'molrep.doc'),
'Molrep jpg':os.path.join(os.getcwd(),'molrep_rf.jpg')})
self.molrep_results = { 'Molrep results' : data }
except:
self.logger.exception('**ERROR in AutoStats.postprocessMolrep**')
def postprocessLabelitPP(self,iteration):
"""
convert pdf's and copy to working dir.
"""
if self.verbose:
self.logger.debug('LabelitPP::postprocessPP')
try:
pdf = '%s.pdf'%iteration
jpg = pdf.replace('pdf','jpg')
if os.path.exists(pdf):
Utils.convertImage(self,pdf,jpg)
if os.path.exists(os.path.join(self.working_dir,jpg)):
os.system('rm -rf %s'%os.path.join(self.working_dir,jpg))
shutil.copy(jpg,self.working_dir)
#Look for errors if pdf not generated
else:
if os.path.exists('%s.log'%iteration):
data = Parse.ParseOutputLabelitPP(self,open('%s.log'%iteration,'r').readlines())
if data != None:
self.total = data
return('kill')
except:
self.logger.exception('**ERROR in LabelitPP.postprocessPP**')
