Python _ordination_results_to_ordres Examples

Example #1

File: test_ordres.py Project: ResilientScience/scikit-bio

    def test_write(self):
        for fp, obj in zip(self.valid_fps, self.ordination_results_objs):
            fh = StringIO()
            _ordination_results_to_ordres(obj, fh)
            obs = fh.getvalue()
            fh.close()

            with open(fp, 'U') as fh:
                exp = fh.read()

            npt.assert_equal(obs, exp)

Example #2

    def test_write(self):
        for fp, obj in zip(self.valid_fps, self.ordination_results_objs):
            fh = StringIO()
            _ordination_results_to_ordres(obj, fh)
            obs = fh.getvalue()
            fh.close()

            with open(fp, 'U') as fh:
                exp = fh.read()

            npt.assert_equal(obs, exp)

Example #3

File: test_ordres.py Project: ResilientScience/scikit-bio

    def test_roundtrip_read_write(self):
        for fp in self.valid_fps:
            # Read.
            obj1 = _ordres_to_ordination_results(fp)

            # Write.
            fh = StringIO()
            _ordination_results_to_ordres(obj1, fh)
            fh.seek(0)

            # Read.
            obj2 = _ordres_to_ordination_results(fh)
            fh.close()

            assert_ordination_results_equal(obj1, obj2)

Example #4

    def test_roundtrip_read_write(self):
        for fp in self.valid_fps:
            # Read.
            obj1 = _ordres_to_ordination_results(fp)

            # Write.
            fh = StringIO()
            _ordination_results_to_ordres(obj1, fh)
            fh.seek(0)

            # Read.
            obj2 = _ordres_to_ordination_results(fh)
            fh.close()

            assert_ordination_results_equal(obj1, obj2)