Example #1
0
 def test_remove_mode_ctf_starfile(self):
     remove = s.zerofill(['91', '092'], 4)
     s.write_file(self.ctf_starfile_in,
                  self.starfile_out,
                  self.filename,
                  self.digits,
                  remove,
                  mode='r')
     with open(self.starfile_out, 'r') as f:
         self.assertMultiLineEqual(f.read(), self.exp_ctf_starfile)
 def test_bad_starfile(self):
     self.assertFalse(s.check_all_exist('/tmp/star1.star', 
         '20160126_BRCA1_GO_0001.mrc', s.zerofill([1,2,91,93], 4)))
 def test_yes_ctf_starfile(self):
     self.assertTrue(s.check_all_exist('/tmp/star1.star', 
         '20160126_BRCA1_GO_0001.mrc', s.zerofill([1,2,91,92], 4)))
 def test_remove_mode_ctf_starfile(self):
     remove = s.zerofill(['91','092'], 4)
     s.write_file(self.ctf_starfile_in, self.starfile_out, 
                  self.filename, self.digits, remove, mode='r')
     with open(self.starfile_out, 'r') as f:
         self.assertMultiLineEqual(f.read(), self.exp_ctf_starfile)
 def test_empty_list(self):
     lst = []
     digits = 3
     self.assertEqual([], s.zerofill(lst, digits))
 def test_integer_list(self):
     lst = [1,2,3]
     digits = 3
     self.assertEqual(['001','002','003'], s.zerofill(lst, digits))
 def test_string_list(self):
     lst = ['1','2','3']
     digits = 3
     self.assertEqual(['001','002','003'], s.zerofill(lst, digits))
Example #8
0
 def test_bad_starfile(self):
     self.assertFalse(
         s.check_all_exist('/tmp/star1.star', '20160126_BRCA1_GO_0001.mrc',
                           s.zerofill([1, 2, 91, 93], 4)))
Example #9
0
 def test_yes_ctf_starfile(self):
     self.assertTrue(
         s.check_all_exist('/tmp/star1.star', '20160126_BRCA1_GO_0001.mrc',
                           s.zerofill([1, 2, 91, 92], 4)))
Example #10
0
 def test_empty_list(self):
     lst = []
     digits = 3
     self.assertEqual([], s.zerofill(lst, digits))
Example #11
0
 def test_integer_list(self):
     lst = [1, 2, 3]
     digits = 3
     self.assertEqual(['001', '002', '003'], s.zerofill(lst, digits))
Example #12
0
 def test_string_list(self):
     lst = ['1', '2', '3']
     digits = 3
     self.assertEqual(['001', '002', '003'], s.zerofill(lst, digits))