def insert_file(h5fh,where,name,title,filename):
fnode=FileNode.newNode(h5fh,where=where,name=name,title=title)
fnode.write(open(filename,'r').read())
import time
fnode.attrs.creationdate=time.asctime()
fnode.attrs.path=os.path.abspath(filename)
import socket
fnode.attrs.host=socket.getfqdn()
fnode.close()
# Copy this file into the clipboard and paste into 'script -c python'.
from __future__ import print_function
from tables.nodes import FileNode
import tables
h5file = tables.open_file('fnode.h5', 'w')
fnode = FileNode.new_node(h5file, where='/', name='fnode_test')
print(h5file.getAttrNode('/fnode_test', 'NODE_TYPE'))
print("This is a test text line.", file=fnode)
print("And this is another one.", file=fnode)
print(file=fnode)
fnode.write("Of course, file methods can also be used.")
fnode.seek(0) # Go back to the beginning of file.
for line in fnode:
print(repr(line))
fnode.close()
print(fnode.closed)
# Copy this file into the clipboad and paste into 'script -c python'.
from tables.nodes import FileNode
import tables
h5file = tables.openFile("fnode.h5", "w")
fnode = FileNode.newNode(h5file, where="/", name="fnode_test")
print h5file.getAttrNode("/fnode_test", "NODE_TYPE")
print >> fnode, "This is a test text line."
print >> fnode, "And this is another one."
print >> fnode
fnode.write("Of course, file methods can also be used.")
fnode.seek(0) # Go back to the beginning of file.
for line in fnode:
print repr(line)
fnode.close()
print fnode.closed
# Copy this file into the clipboard and paste into 'script -c python'.
from tables.nodes import FileNode
import tables
h5file = tables.openFile('fnode.h5', 'w')
fnode = FileNode.newNode(h5file, where='/', name='fnode_test')
print h5file.getAttrNode('/fnode_test', 'NODE_TYPE')
print >> fnode, "This is a test text line."
print >> fnode, "And this is another one."
print >> fnode
fnode.write("Of course, file methods can also be used.")
fnode.seek(0) # Go back to the beginning of file.
for line in fnode:
print repr(line)
fnode.close()
print fnode.closed
node = h5file.root.fnode_test
fnode = FileNode.openNode(node, 'a+')
print repr(fnode.readline())
print fnode.tell()
print >> fnode, "This is a new line."
print repr(fnode.readline())
def get_sorted_data():
myfields = nmag2._get_nfem_fields()
mdata = numpy.array(myfields.m.m_Py.data)
msites = numpy.array(myfields.m.m_Py.site)
#get order right, double check for 2nd order
sort_ind = msites.argsort(axis=0)
mdatasorted = numpy.take(mdata,sort_ind)
os.remove('test.h5')
savefield('test.h5','test.h5')
f=tables.openFile('test.h5')
node = f.root.sim.source
fnode = FileNode.openNode(node)
for line in fnode.readlines():
print repr(line)
fnode.close()
f=open('test.h5','r')
#print str(f)
f.close()
os.system('h5ls -r test.h5')
#os.system('ptdump -av test.h5')
#os.system('ptdump -d test.h5:/sim/source')
