import os, sys, glob
import utilities
inFilePath = sys.argv[1]
header = sys.argv[2].decode("string-escape")
text = header + "\n" + utilities.readTextFromFile(inFilePath)
utilities.writeScalarToFile(text, inFilePath)
import os, sys, glob
import utilities
inFilePath = sys.argv[1]
findValue = sys.argv[2].decode('string-escape')
replaceValue = sys.argv[3].decode('string-escape')
outFilePath = sys.argv[4]
text = utilities.readTextFromFile(inFilePath)
text = text.replace(findValue, replaceValue)
utilities.writeScalarToFile(text, outFilePath)
print "Argument 3 must be 1 (for row) or 2 (for column)"
byColumn = sys.argv[4] == "2"
outFilePath = sys.argv[5]
data = utilities.readMatrixFromFile(inFilePath)
if hasHeaderRow:
headerRow = data.pop(0)
rowNames = [x[0] for x in data]
data = [x[1:] for x in data]
data = [[float(y) for y in x] for x in data]
if byColumn:
data = utilities.transposeMatrix(data)
data = [transformFunction(x) for x in data]
if byColumn:
data = utilities.transposeMatrix(data)
outText = ""
if hasHeaderRow:
outText = "\t".join(headerRow) + "\n"
for i in range(len(data)):
outText += "\t".join([rowNames[i]] + [str(x) for x in data[i]]) + "\n"
utilities.writeScalarToFile(outText, outFilePath)
