def get_contributors(auth, node, **kwargs):
# Can set limit to only receive a specified number of contributors in a call to this route
if request.args.get('limit'):
try:
limit = int(request.args['limit'])
except ValueError:
raise HTTPError(http.BAD_REQUEST, data=dict(
message_long='Invalid value for "limit": {}'.format(request.args['limit'])
))
else:
limit = None
anonymous = has_anonymous_link(node, auth)
if anonymous or not node.can_view(auth):
raise HTTPError(http.FORBIDDEN)
# Limit is either an int or None:
# if int, contribs list is sliced to specified length
# if None, contribs list is not sliced
contribs = profile_utils.serialize_contributors(
node.visible_contributors[0:limit],
node=node,
)
# Will either return just contributor list or contributor list + 'more' element
if limit:
return {
'contributors': contribs,
'more': max(0, len(node.visible_contributors) - limit)
}
else:
return {'contributors': contribs}
def _get_logs(node, count, auth, link=None, page=0):
"""
:param Node node:
:param int count:
:param auth:
:return list: List of serialized logs,
boolean: if there are more logs
"""
logs = []
total = 0
for log in reversed(node.logs):
# A number of errors due to database inconsistency can arise here. The
# log can be None; its `node__logged` back-ref can be empty, and the
# 0th logged node can be None. Need to make sure that log is not None
if log:
log_node = log.resolve_node(node)
if log.can_view(node, auth):
total += 1
anonymous = has_anonymous_link(log_node, auth)
logs.append(serialize_log(log, anonymous))
else:
logger.warn('Log on node {} is None'.format(node._id))
paginated_logs, pages = paginate(logs, total, page, count)
return list(paginated_logs), total, pages
def _get_summary(node, auth, rescale_ratio, primary=True, link_id=None, show_path=False):
# TODO(sloria): Refactor this or remove (lots of duplication with _view_project)
summary = {
'id': link_id if link_id else node._id,
'primary': primary,
'is_registration': node.is_registration,
'is_fork': node.is_fork,
'is_pending_registration': node.is_pending_registration,
'is_retracted': node.is_retracted,
'is_pending_retraction': node.is_pending_retraction,
'embargo_end_date': node.embargo_end_date.strftime("%A, %b. %d, %Y") if node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo,
'archiving': node.archiving,
}
if node.can_view(auth):
summary.update({
'can_view': True,
'can_edit': node.can_edit(auth),
'primary_id': node._id,
'url': node.url,
'primary': primary,
'api_url': node.api_url,
'title': node.title,
'category': node.category,
'node_type': node.project_or_component,
'is_fork': node.is_fork,
'is_registration': node.is_registration,
'anonymous': has_anonymous_link(node, auth),
'registered_date': node.registered_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_registration
else None,
'forked_date': node.forked_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_fork
else None,
'nlogs': None,
'ua_count': None,
'ua': None,
'non_ua': None,
'addons_enabled': node.get_addon_names(),
'is_public': node.is_public,
'parent_title': node.parent_node.title if node.parent_node else None,
'parent_is_public': node.parent_node.is_public if node.parent_node else False,
'show_path': show_path
})
if rescale_ratio:
ua_count, ua, non_ua = _get_user_activity(node, auth, rescale_ratio)
summary.update({
'nlogs': len(node.logs),
'ua_count': ua_count,
'ua': ua,
'non_ua': non_ua,
})
else:
summary['can_view'] = False
# TODO: Make output format consistent with _view_project
return {
'summary': summary,
}
def node_register_template_page(auth, node, metaschema_id, **kwargs):
if node.is_registration and bool(node.registered_schema):
try:
meta_schema = RegistrationSchema.objects.get(_id=metaschema_id)
except RegistrationSchema.DoesNotExist:
# backwards compatability for old urls, lookup by name
meta_schema = RegistrationSchema.objects.filter(name=_id_to_name(metaschema_id)).order_by('-schema_version').first()
if not meta_schema:
raise HTTPError(http.NOT_FOUND, data={
'message_short': 'Invalid schema name',
'message_long': 'No registration schema with that name could be found.'
})
if not node.registered_schema.filter(id=meta_schema.id).exists():
raise HTTPError(http.BAD_REQUEST, data={
'message_short': 'Invalid schema',
'message_long': 'This registration has no registration supplment with that name.'
})
ret = _view_project(node, auth, primary=True)
my_meta = serialize_meta_schema(meta_schema)
if has_anonymous_link(node, auth):
for indx, schema_page in enumerate(my_meta['schema']['pages']):
for idx, schema_question in enumerate(schema_page['questions']):
if schema_question['title'] in settings.ANONYMIZED_TITLES:
del my_meta['schema']['pages'][indx]['questions'][idx]
ret['node']['registered_schema'] = serialize_meta_schema(meta_schema)
return ret
else:
status.push_status_message(
'You have been redirected to the project\'s registrations page. From here you can initiate a new Draft Registration to complete the registration process',
trust=False,
id='redirected_to_registrations',
)
return redirect(node.web_url_for('node_registrations', view=kwargs.get('template'), _guid=True))
def comment_discussion(auth, node, **kwargs):
users = collect_discussion(node)
anonymous = has_anonymous_link(node, auth)
# Sort users by comment frequency
# TODO: Allow sorting by recency, combination of frequency and recency
sorted_users = sorted(
users.keys(),
key=lambda item: len(users[item]),
reverse=True,
)
return {
'discussion': [
{
'id': privacy_info_handle(user._id, anonymous),
'url': privacy_info_handle(user.url, anonymous),
'fullname': privacy_info_handle(user.fullname, anonymous, name=True),
'isContributor': node.is_contributor(user),
'gravatarUrl': privacy_info_handle(
gravatar(
user, use_ssl=True, size=settings.GRAVATAR_SIZE_DISCUSSION,
),
anonymous
),
}
for user in sorted_users
]
}
def get_node_contributors_abbrev(auth, node, **kwargs):
anonymous = has_anonymous_link(node, auth)
formatter = "surname"
max_count = kwargs.get("max_count", 3)
if "user_ids" in kwargs:
users = [User.load(user_id) for user_id in kwargs["user_ids"] if user_id in node.visible_contributor_ids]
else:
users = node.visible_contributors
if anonymous or not node.can_view(auth):
raise HTTPError(http.FORBIDDEN)
contributors = []
n_contributors = len(users)
others_count = ""
for index, user in enumerate(users[:max_count]):
if index == max_count - 1 and len(users) > max_count:
separator = " &"
others_count = str(n_contributors - 3)
elif index == len(users) - 1:
separator = ""
elif index == len(users) - 2:
separator = " &"
else:
separator = ","
contributor = user.get_summary(formatter)
contributor["user_id"] = user._primary_key
contributor["separator"] = separator
contributors.append(contributor)
return {"contributors": contributors, "others_count": others_count}
def _get_logs(node, count, auth, link=None, offset=0):
"""
:param Node node:
:param int count:
:param auth:
:return list: List of serialized logs,
boolean: if there are more logs
"""
logs = []
has_more_logs = False
for log in (x for idx, x in enumerate(reversed(node.logs)) if idx >= offset):
# A number of errors due to database inconsistency can arise here. The
# log can be None; its `node__logged` back-ref can be empty, and the
# 0th logged node can be None. Catch and log these errors and ignore
# the offending logs.
log_node = log.resolve_node(node)
if log.can_view(node, auth):
anonymous = has_anonymous_link(log_node, auth)
if len(logs) < count:
logs.append(serialize_log(log, anonymous))
else:
has_more_logs = True
break
return logs, has_more_logs
def osf_storage_get_revisions(payload, node_addon, **kwargs):
node = node_addon.owner
page = payload.get('page') or 0
path = payload.get('path')
is_anon = has_anonymous_link(node, Auth(private_key=payload.get('view_only')))
if not path:
raise HTTPError(httplib.BAD_REQUEST)
try:
page = int(page)
except (TypeError, ValueError):
raise HTTPError(httplib.BAD_REQUEST)
record = model.OsfStorageFileRecord.find_by_path(path, node_addon)
if record is None:
raise HTTPError(httplib.NOT_FOUND)
indices, versions, more = record.get_versions(
page,
size=osf_storage_settings.REVISIONS_PAGE_SIZE,
)
return {
'revisions': [
utils.serialize_revision(node, record, versions[idx], indices[idx], anon=is_anon)
for idx in range(len(versions))
],
'more': more,
}
def dataverse_get_file_info(node_addon, auth, **kwargs):
"""API view that gets info for a file."""
node = node_addon.owner
file_id = kwargs.get('path')
fail_if_unauthorized(node_addon, auth, file_id)
fail_if_private(file_id)
anonymous = has_anonymous_link(node, auth)
download_url = node.web_url_for('dataverse_download_file', path=file_id)
dataverse_url = 'http://{0}/dvn/dv/'.format(HOST) + node_addon.dataverse_alias
study_url = 'http://dx.doi.org/' + node_addon.study_hdl
delete_url = node.api_url_for('dataverse_delete_file', path=file_id)
data = {
'node': {
'id': node._id,
'title': node.title
},
'filename': scrape_dataverse(file_id, name_only=True)[0],
'dataverse': privacy_info_handle(node_addon.dataverse, anonymous),
'study': privacy_info_handle(node_addon.study, anonymous),
'urls': {
'dataverse': privacy_info_handle(dataverse_url, anonymous),
'study': privacy_info_handle(study_url, anonymous),
'download': privacy_info_handle(download_url, anonymous),
'delete': privacy_info_handle(delete_url, anonymous),
'files': node.web_url_for('collect_file_trees'),
}
}
return {'data': data}, httplib.OK
def serialize_node_summary(node, auth, primary=True, show_path=False):
summary = {
'id': node._id,
'primary': primary,
'is_registration': node.is_registration,
'is_fork': node.is_fork,
'is_pending_registration': node.is_pending_registration,
'is_retracted': node.is_retracted,
'is_pending_retraction': node.is_pending_retraction,
'embargo_end_date': node.embargo_end_date.strftime('%A, %b. %d, %Y') if node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo,
'is_embargoed': node.is_embargoed,
'archiving': node.archiving,
}
contributor_data = serialize_contributors_for_summary(node)
parent_node = node.parent_node
user = auth.user
if node.can_view(auth):
summary.update({
'can_view': True,
'can_edit': node.can_edit(auth),
'primary_id': node._id,
'url': node.url,
'primary': primary,
'api_url': node.api_url,
'title': node.title,
'category': node.category,
'isPreprint': bool(node.preprint_file_id),
'childExists': bool(node.nodes_active),
'is_admin': node.has_permission(user, permissions.ADMIN),
'is_contributor': node.is_contributor(user),
'logged_in': auth.logged_in,
'node_type': node.project_or_component,
'is_fork': node.is_fork,
'is_registration': node.is_registration,
'anonymous': has_anonymous_link(node, auth),
'registered_date': node.registered_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_registration
else None,
'forked_date': node.forked_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_fork
else None,
'ua_count': None,
'ua': None,
'non_ua': None,
'is_public': node.is_public,
'parent_title': parent_node.title if parent_node else None,
'parent_is_public': parent_node.is_public if parent_node else False,
'show_path': show_path,
# Read nlogs annotation if possible
'nlogs': node.nlogs if hasattr(node, 'nlogs') else node.logs.count(),
'contributors': contributor_data['contributors'],
'others_count': contributor_data['others_count'],
})
else:
summary['can_view'] = False
return summary
def osfstorage_get_revisions(file_node, node_addon, payload, **kwargs):
is_anon = has_anonymous_link(node_addon.owner, Auth(private_key=request.args.get('view_only')))
# Return revisions in descending order
return {
'revisions': [
utils.serialize_revision(node_addon.owner, file_node, version, index=len(file_node.versions) - idx - 1, anon=is_anon)
for idx, version in enumerate(reversed(file_node.versions))
]
}
def file_info(auth, fid, **kwargs):
versions = []
node = kwargs['node'] or kwargs['project']
file_name = fid
file_name_clean = urlsafe_filename(file_name)
files_page_url = node.web_url_for('collect_file_trees')
latest_download_url = None
api_url = None
anonymous = has_anonymous_link(node, auth)
try:
files_versions = node.files_versions[file_name_clean]
except KeyError:
raise HTTPError(http.NOT_FOUND)
latest_version_number = get_latest_version_number(file_name_clean, node) + 1
for idx, version in enumerate(list(reversed(files_versions))):
node_file = NodeFile.load(version)
number = len(files_versions) - idx
unique, total = get_basic_counters('download:{}:{}:{}'.format(
node._primary_key,
file_name_clean,
number,
))
download_url = node_file.download_url(node)
api_url = node_file.api_url(node)
versions.append({
'file_name': file_name,
'download_url': download_url,
'version_number': number,
'display_number': number if idx > 0 else 'current',
'modified_date': node_file.date_uploaded.strftime('%Y/%m/%d %I:%M %p'),
'downloads': total if total else 0,
'committer_name': privacy_info_handle(
node_file.uploader.fullname, anonymous, name=True
),
'committer_url': privacy_info_handle(node_file.uploader.url, anonymous),
})
if number == latest_version_number:
latest_download_url = download_url
return {
'node_title': node.title,
'file_name': file_name,
'versions': versions,
'registered': node.is_registration,
'urls': {
'api': api_url,
'files': files_page_url,
'latest': {
'download': latest_download_url,
},
}
}
def _get_summary(node, auth, rescale_ratio, primary=True, link_id=None, show_path=False):
# TODO(sloria): Refactor this or remove (lots of duplication with _view_project)
summary = {
"id": link_id if link_id else node._id,
"primary": primary,
"is_registration": node.is_registration,
"is_fork": node.is_fork,
"is_pending_registration": node.is_pending_registration,
"is_retracted": node.is_retracted,
"is_pending_retraction": node.is_pending_retraction,
"embargo_end_date": node.embargo_end_date.strftime("%A, %b. %d, %Y") if node.embargo_end_date else False,
"is_pending_embargo": node.is_pending_embargo,
"archiving": node.archiving,
}
if node.can_view(auth):
summary.update(
{
"can_view": True,
"can_edit": node.can_edit(auth),
"primary_id": node._id,
"url": node.url,
"primary": primary,
"api_url": node.api_url,
"title": node.title,
"category": node.category,
"node_type": node.project_or_component,
"is_fork": node.is_fork,
"is_registration": node.is_registration,
"anonymous": has_anonymous_link(node, auth),
"registered_date": node.registered_date.strftime("%Y-%m-%d %H:%M UTC")
if node.is_registration
else None,
"forked_date": node.forked_date.strftime("%Y-%m-%d %H:%M UTC") if node.is_fork else None,
"nlogs": None,
"ua_count": None,
"ua": None,
"non_ua": None,
"addons_enabled": node.get_addon_names(),
"is_public": node.is_public,
"parent_title": node.parent_node.title if node.parent_node else None,
"parent_is_public": node.parent_node.is_public if node.parent_node else False,
"show_path": show_path,
}
)
if rescale_ratio:
ua_count, ua, non_ua = _get_user_activity(node, auth, rescale_ratio)
summary.update({"nlogs": len(node.logs), "ua_count": ua_count, "ua": ua, "non_ua": non_ua})
else:
summary["can_view"] = False
# TODO: Make output format consistent with _view_project
return {"summary": summary}
def list_comments(auth, node, **kwargs):
anonymous = has_anonymous_link(node, auth)
guid = request.args.get('target')
target = resolve_target(node, guid)
serialized_comments = serialize_comments(target, auth, anonymous)
n_unread = 0
if node.is_contributor(auth.user):
if auth.user.comments_viewed_timestamp is None:
auth.user.comments_viewed_timestamp = {}
auth.user.save()
n_unread = n_unread_comments(target, auth.user)
return {
'comments': serialized_comments,
'nUnread': n_unread
}
def osf_storage_get_revisions(payload, node_addon, **kwargs):
node = node_addon.owner
path = payload.get('path')
is_anon = has_anonymous_link(node, Auth(private_key=payload.get('view_only')))
if not path:
raise HTTPError(httplib.BAD_REQUEST)
record = model.OsfStorageFileNode.get(path.strip('/'), node_addon)
# Return revisions in descending order
return {
'revisions': [
utils.serialize_revision(node, record, version, index=len(record.versions) - idx - 1, anon=is_anon)
for idx, version in enumerate(reversed(record.versions))
]
}
def get_node_contributors_abbrev(auth, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
max_count = kwargs.get('max_count', 3)
if 'user_ids' in kwargs:
users = [
User.load(user_id) for user_id in kwargs['user_ids']
if user_id in node.visible_contributor_ids
]
else:
users = node.visible_contributors
if anonymous or not node.can_view(auth):
raise HTTPError(http.FORBIDDEN)
contributors = []
n_contributors = len(users)
others_count = ''
for index, user in enumerate(users[:max_count]):
if index == max_count - 1 and len(users) > max_count:
separator = ' &'
others_count = str(n_contributors - 3)
elif index == len(users) - 1:
separator = ''
elif index == len(users) - 2:
separator = ' &'
else:
separator = ','
contributors.append({
'user_id': user._primary_key,
'separator': separator,
})
return {
'contributors': contributors,
'others_count': others_count,
}
def _get_logs(node, count, auth, link=None, page=0):
"""
:param Node node:
:param int count:
:param auth:
:return list: List of serialized logs,
boolean: if there are more logs
"""
logs_set = node.get_aggregate_logs_queryset(auth)
total = len(logs_set)
start = page * count
stop = start + count
logs = [
serialize_log(log, auth=auth, anonymous=has_anonymous_link(node, auth))
for log in logs_set[start:stop]
]
pages = math.ceil(total / float(count))
return logs, total, pages
def get_node_contributors_abbrev(auth, node, **kwargs):
anonymous = has_anonymous_link(node, auth)
formatter = 'surname'
max_count = kwargs.get('max_count', 3)
if 'user_ids' in kwargs:
users = [
User.load(user_id) for user_id in kwargs['user_ids']
if user_id in node.visible_contributor_ids
]
else:
users = node.visible_contributors
if anonymous or not node.can_view(auth):
raise HTTPError(http.FORBIDDEN)
contributors = []
n_contributors = len(users)
others_count = ''
for index, user in enumerate(users[:max_count]):
if index == max_count - 1 and len(users) > max_count:
separator = ' &'
others_count = str(n_contributors - 3)
elif index == len(users) - 1:
separator = ''
elif index == len(users) - 2:
separator = ' &'
else:
separator = ','
contributor = user.get_summary(formatter)
contributor['user_id'] = user._primary_key
contributor['separator'] = separator
contributors.append(contributor)
return {
'contributors': contributors,
'others_count': others_count,
}
def osfstorage_get_revisions(file_node, node_addon, payload, **kwargs):
from osf.models import PageCounter, FileVersion # TODO Fix me onces django works
is_anon = has_anonymous_link(node_addon.owner, Auth(private_key=request.args.get('view_only')))
counter_prefix = 'download:{}:{}:'.format(file_node.node._id, file_node._id)
version_count = file_node.versions.count()
# Don't worry. The only % at the end of the LIKE clause, the index is still used
counts = dict(PageCounter.objects.filter(_id__startswith=counter_prefix).values_list('_id', 'total'))
qs = FileVersion.includable_objects.filter(basefilenode__id=file_node.id).include('creator__guids').order_by('-created')
for i, version in enumerate(qs):
version._download_count = counts.get('{}{}'.format(counter_prefix, version_count - i - 1), 0)
# Return revisions in descending order
return {
'revisions': [
utils.serialize_revision(node_addon.owner, file_node, version, index=version_count - idx - 1, anon=is_anon)
for idx, version in enumerate(qs)
]
}
def node_register_template_page(auth, node, metaschema_id, **kwargs):
if node.is_registration and bool(node.registered_schema):
try:
meta_schema = MetaSchema.find_one(
Q('_id', 'eq', metaschema_id)
)
except NoResultsFound:
# backwards compatability for old urls, lookup by name
try:
meta_schema = MetaSchema.find(
Q('name', 'eq', _id_to_name(metaschema_id))
).sort('-schema_version')[0]
except IndexError:
raise HTTPError(http.NOT_FOUND, data={
'message_short': 'Invalid schema name',
'message_long': 'No registration schema with that name could be found.'
})
if meta_schema not in node.registered_schema:
raise HTTPError(http.BAD_REQUEST, data={
'message_short': 'Invalid schema',
'message_long': 'This registration has no registration supplment with that name.'
})
ret = _view_project(node, auth, primary=True)
my_meta = serialize_meta_schema(meta_schema)
if has_anonymous_link(node, auth):
for indx, schema_page in enumerate(my_meta['schema']['pages']):
for idx, schema_question in enumerate(schema_page['questions']):
if schema_question['title'] in settings.ANONYMIZED_TITLES:
del my_meta['schema']['pages'][indx]['questions'][idx]
ret['node']['registered_schema'] = serialize_meta_schema(meta_schema)
return ret
else:
status.push_status_message(
'You have been redirected to the project\'s registrations page. From here you can initiate a new Draft Registration to complete the registration process',
trust=False
)
return redirect(node.web_url_for('node_registrations', view=kwargs.get('template')))
def project_wiki_page(auth, wname, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
wiki_name = (wname or '').strip()
wiki_page = node.get_wiki_page(name=wiki_name)
status_code = 200
version = 'NA'
is_current = False
content = ''
if wiki_page:
version = wiki_page.version
is_current = wiki_page.is_current
content = wiki_page.html(node)
elif not wiki_page and wiki_name.lower() != 'home':
status_code = 404
ret = {
'wiki_id': wiki_page._primary_key if wiki_page else None,
'wiki_name': wiki_page.page_name if wiki_page else wiki_name,
'wiki_content': content,
'page': wiki_page,
'version': version,
'versions': _get_wiki_versions(node, wiki_name, anonymous=anonymous),
'is_current': is_current,
'is_edit': False,
'pages_current': _get_wiki_pages_current(node),
'toc': _serialize_wiki_toc(node, auth=auth),
'category': node.category,
'urls': {
'api': _get_wiki_api_urls(node, wiki_name),
'web': _get_wiki_web_urls(node, wiki_name),
},
}
ret.update(_view_project(node, auth, primary=True))
return ret, status_code
def project_wiki_compare(auth, wname, wver, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
wiki_name = wname.strip()
wiki_page = node.get_wiki_page(wiki_name)
toc = _serialize_wiki_toc(node, auth=auth)
if not wiki_page:
raise HTTPError(http.NOT_FOUND)
comparison_page = node.get_wiki_page(wiki_name, wver)
if comparison_page:
current = wiki_page.content
comparison = comparison_page.content
sm = difflib.SequenceMatcher(None, comparison, current)
content = show_diff(sm)
content = content.replace('\n', '<br />')
ret = {
'wiki_id': wiki_page._primary_key,
'wiki_name': wiki_page.page_name,
'wiki_content': content,
'versions': _get_wiki_versions(node, wiki_name, anonymous),
'is_current': True,
'is_edit': False,
'version': wiki_page.version,
'compare_version': wver,
'pages_current': _get_wiki_pages_current(node),
'toc': toc,
'category': node.category,
'urls': {
'api': _get_wiki_api_urls(node, wiki_name),
'web': _get_wiki_web_urls(node, wiki_name, wver),
},
}
ret.update(_view_project(node, auth, primary=True))
return ret
raise HTTPError(http.NOT_FOUND)
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.parent_node
if user:
dashboard = find_dashboard(user)
dashboard_id = dashboard._id
in_dashboard = dashboard.pointing_at(node._primary_key) is not None
else:
in_dashboard = False
dashboard_id = ""
view_only_link = auth.private_key or request.args.get("view_only", "").strip("/")
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + "?view_only=None"
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, kind="info", dismissible=False, trust=True)
data = {
"node": {
"id": node._primary_key,
"title": node.title,
"category": node.category_display,
"category_short": node.category,
"node_type": node.project_or_component,
"description": node.description or "",
"license": serialize_node_license_record(node.license),
"url": node.url,
"api_url": node.api_url,
"absolute_url": node.absolute_url,
"redirect_url": redirect_url,
"display_absolute_url": node.display_absolute_url,
"update_url": node.api_url_for("update_node"),
"in_dashboard": in_dashboard,
"is_public": node.is_public,
"is_archiving": node.archiving,
"date_created": iso8601format(node.date_created),
"date_modified": iso8601format(node.logs[-1].date) if node.logs else "",
"tags": [tag._primary_key for tag in node.tags],
"children": bool(node.nodes_active),
"is_registration": node.is_registration,
"is_pending_registration": node.is_pending_registration,
"is_retracted": node.is_retracted,
"is_pending_retraction": node.is_pending_retraction,
"retracted_justification": getattr(node.retraction, "justification", None),
"embargo_end_date": node.embargo_end_date.strftime("%A, %b. %d, %Y") if node.embargo_end_date else False,
"is_pending_embargo": node.is_pending_embargo,
"registered_from_url": node.registered_from.url if node.is_registration else "",
"registered_date": iso8601format(node.registered_date) if node.is_registration else "",
"root_id": node.root._id,
"registered_meta": node.registered_meta,
"registered_schemas": serialize_meta_schemas(node.registered_schema),
"registration_count": len(node.node__registrations),
"is_fork": node.is_fork,
"forked_from_id": node.forked_from._primary_key if node.is_fork else "",
"forked_from_display_absolute_url": node.forked_from.display_absolute_url if node.is_fork else "",
"forked_date": iso8601format(node.forked_date) if node.is_fork else "",
"fork_count": len(node.forks),
"templated_count": len(node.templated_list),
"watched_count": len(node.watchconfig__watched),
"private_links": [x.to_json() for x in node.private_links_active],
"link": view_only_link,
"anonymous": anonymous,
"points": len(node.get_points(deleted=False, folders=False)),
"piwik_site_id": node.piwik_site_id,
"comment_level": node.comment_level,
"has_comments": bool(getattr(node, "commented", [])),
"has_children": bool(getattr(node, "commented", False)),
"identifiers": {"doi": node.get_identifier_value("doi"), "ark": node.get_identifier_value("ark")},
"has_draft_registrations": bool(node.draft_registrations_active),
},
"parent_node": {
"exists": parent is not None,
"id": parent._primary_key if parent else "",
"title": parent.title if parent else "",
"category": parent.category_display if parent else "",
"url": parent.url if parent else "",
"api_url": parent.api_url if parent else "",
"absolute_url": parent.absolute_url if parent else "",
"registrations_url": parent.web_url_for("node_registrations") if parent else "",
"is_public": parent.is_public if parent else "",
"is_contributor": parent.is_contributor(user) if parent else "",
"can_view": parent.can_view(auth) if parent else False,
},
"user": {
"is_contributor": node.is_contributor(user),
"is_admin": node.has_permission(user, ADMIN),
"is_admin_parent": parent.is_admin_parent(user) if parent else False,
"can_edit": (node.can_edit(auth) and not node.is_registration),
"has_read_permissions": node.has_permission(user, READ),
"permissions": node.get_permissions(user) if user else [],
"is_watching": user.is_watching(node) if user else False,
"piwik_token": user.piwik_token if user else "",
"id": user._id if user else None,
"username": user.username if user else None,
"fullname": user.fullname if user else "",
"can_comment": node.can_comment(auth),
"show_wiki_widget": _should_show_wiki_widget(node, user),
"dashboard_id": dashboard_id,
},
"badges": _get_badge(user),
# TODO: Namespace with nested dicts
"addons_enabled": node.get_addon_names(),
"addons": configs,
"addon_widgets": widgets,
"addon_widget_js": js,
"addon_widget_css": css,
"node_categories": Node.CATEGORY_MAP,
}
return data
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.parent_node
if user:
dashboard = find_dashboard(user)
dashboard_id = dashboard._id
in_dashboard = dashboard.pointing_at(node._primary_key) is not None
else:
in_dashboard = False
dashboard_id = ''
view_only_link = auth.private_key or request.args.get('view_only',
'').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message,
kind='info',
dismissible=False,
trust=True)
data = {
'node': {
'id':
node._primary_key,
'title':
node.title,
'category':
node.category_display,
'category_short':
node.category,
'node_type':
node.project_or_component,
'description':
node.description or '',
'url':
node.url,
'api_url':
node.api_url,
'absolute_url':
node.absolute_url,
'redirect_url':
redirect_url,
'display_absolute_url':
node.display_absolute_url,
'update_url':
node.api_url_for('update_node'),
'in_dashboard':
in_dashboard,
'is_public':
node.is_public,
'is_archiving':
node.archiving,
'date_created':
iso8601format(node.date_created),
'date_modified':
iso8601format(node.logs[-1].date) if node.logs else '',
'tags': [tag._primary_key for tag in node.tags],
'children':
bool(node.nodes),
'is_registration':
node.is_registration,
'is_retracted':
node.is_retracted,
'pending_retraction':
node.pending_retraction,
'retracted_justification':
getattr(node.retraction, 'justification', None),
'embargo_end_date':
node.embargo_end_date.strftime("%A, %b. %d, %Y")
if node.embargo_end_date else False,
'pending_embargo':
node.pending_embargo,
'registered_from_url':
node.registered_from.url if node.is_registration else '',
'registered_date':
iso8601format(node.registered_date)
if node.is_registration else '',
'root_id':
node.root._id,
'registered_meta': [{
'name_no_ext': from_mongo(meta),
'name_clean': clean_template_name(meta),
} for meta in node.registered_meta or []],
'registration_count':
len(node.node__registrations),
'is_fork':
node.is_fork,
'forked_from_id':
node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url':
node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date':
iso8601format(node.forked_date) if node.is_fork else '',
'fork_count':
len(node.forks),
'templated_count':
len(node.templated_list),
'watched_count':
len(node.watchconfig__watched),
'private_links': [x.to_json() for x in node.private_links_active],
'link':
view_only_link,
'anonymous':
anonymous,
'points':
len(node.get_points(deleted=False, folders=False)),
'piwik_site_id':
node.piwik_site_id,
'comment_level':
node.comment_level,
'has_comments':
bool(getattr(node, 'commented', [])),
'has_children':
bool(getattr(node, 'commented', False)),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
},
'parent_node': {
'exists':
parent is not None,
'id':
parent._primary_key if parent else '',
'title':
parent.title if parent else '',
'category':
parent.category_display if parent else '',
'url':
parent.url if parent else '',
'api_url':
parent.api_url if parent else '',
'absolute_url':
parent.absolute_url if parent else '',
'registrations_url':
parent.web_url_for('node_registrations') if parent else '',
'is_public':
parent.is_public if parent else '',
'is_contributor':
parent.is_contributor(user) if parent else '',
'can_view':
parent.can_view(auth) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'is_admin_parent':
parent.is_admin_parent(user) if parent else False,
'can_edit': (node.can_edit(auth) and not node.is_registration),
'has_read_permissions': node.has_permission(user, 'read'),
'permissions': node.get_permissions(user) if user else [],
'is_watching': user.is_watching(node) if user else False,
'piwik_token': user.piwik_token if user else '',
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
'dashboard_id': dashboard_id,
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': Node.CATEGORY_MAP,
}
return data
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.parent_node
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, dismissible=False)
data = {
'node': {
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'node_type': node.project_or_component,
'description': node.description or '',
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'citations': {
'apa': node.citation_apa,
'mla': node.citation_mla,
'chicago': node.citation_chicago,
} if not anonymous else '',
'is_public': node.is_public,
'date_created': iso8601format(node.date_created),
'date_modified': iso8601format(node.logs[-1].date) if node.logs else '',
'tags': [tag._primary_key for tag in node.tags],
'children': bool(node.nodes),
'is_registration': node.is_registration,
'registered_from_url': node.registered_from.url if node.is_registration else '',
'registered_date': iso8601format(node.registered_date) if node.is_registration else '',
'registered_meta': [
{
'name_no_ext': from_mongo(meta),
'name_clean': clean_template_name(meta),
}
for meta in node.registered_meta or []
],
'registration_count': len(node.node__registrations),
'is_fork': node.is_fork,
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': len(node.node__forked.find(Q('is_deleted', 'eq', False))),
'templated_count': len(node.templated_list),
'watched_count': len(node.watchconfig__watched),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'anonymous': anonymous,
'points': len(node.get_points(deleted=False, folders=False)),
'piwik_site_id': node.piwik_site_id,
'comment_level': node.comment_level,
'has_comments': bool(getattr(node, 'commented', [])),
'has_children': bool(getattr(node, 'commented', False)),
},
'parent_node': {
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': (auth.private_key in parent.private_link_keys_active) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'can_edit': (node.can_edit(auth)
and not node.is_registration),
'permissions': node.get_permissions(user) if user else [],
'is_watching': user.is_watching(node) if user else False,
'piwik_token': user.piwik_token if user else '',
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
}
return data
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.find_readable_antecedent(auth)
if user:
bookmark_collection = find_bookmark_collection(user)
bookmark_collection_id = bookmark_collection._id
in_bookmark_collection = bookmark_collection.pointing_at(node._primary_key) is not None
else:
in_bookmark_collection = False
bookmark_collection_id = ''
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
disapproval_link = ''
if (node.is_pending_registration and node.has_permission(user, ADMIN)):
disapproval_link = node.root.registration_approval.stashed_urls.get(user._id, {}).get('reject', '')
if (node.is_pending_embargo and node.has_permission(user, ADMIN)):
disapproval_link = node.root.embargo.stashed_urls.get(user._id, {}).get('reject', '')
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, kind='info', dismissible=False, trust=True)
data = {
'node': {
'disapproval_link': disapproval_link,
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'category_short': node.category,
'node_type': node.project_or_component,
'description': node.description or '',
'license': serialize_node_license_record(node.license),
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'update_url': node.api_url_for('update_node'),
'in_dashboard': in_bookmark_collection,
'is_public': node.is_public,
'is_archiving': node.archiving,
'date_created': iso8601format(node.date_created),
'date_modified': iso8601format(node.logs[-1].date) if node.logs else '',
'tags': [tag._primary_key for tag in node.tags],
'children': bool(node.nodes_active),
'is_registration': node.is_registration,
'is_pending_registration': node.is_pending_registration,
'is_retracted': node.is_retracted,
'is_pending_retraction': node.is_pending_retraction,
'retracted_justification': getattr(node.retraction, 'justification', None),
'embargo_end_date': node.embargo_end_date.strftime('%A, %b. %d, %Y') if node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo,
'is_embargoed': node.is_embargoed,
'is_pending_embargo_termination': node.is_embargoed and (
node.embargo_termination_approval and
node.embargo_termination_approval.is_pending_approval
),
'registered_from_url': node.registered_from.url if node.is_registration else '',
'registered_date': iso8601format(node.registered_date) if node.is_registration else '',
'root_id': node.root._id if node.root else None,
'registered_meta': node.registered_meta,
'registered_schemas': serialize_meta_schemas(node.registered_schema),
'registration_count': node.registrations_all.count(),
'is_fork': node.is_fork,
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': node.forks.count(),
'templated_count': node.templated_list.count(),
'watched_count': node.watches.count(),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'anonymous': anonymous,
'points': len(node.get_points(deleted=False, folders=False)),
'comment_level': node.comment_level,
'has_comments': bool(Comment.find(Q('node', 'eq', node))),
'has_children': bool(Comment.find(Q('node', 'eq', node))),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
'institutions': get_affiliated_institutions(node) if node else [],
'alternative_citations': [citation.to_json() for citation in node.alternative_citations],
'has_draft_registrations': node.has_active_draft_registrations,
'contributors': [contributor._id for contributor in node.contributors],
'is_preprint': node.is_preprint,
'is_preprint_orphan': node.is_preprint_orphan,
'preprint_file_id': node.preprint_file._id if node.preprint_file else None
},
'parent_node': {
'exists': parent is not None,
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'category': parent.category_display if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'registrations_url': parent.web_url_for('node_registrations') if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': parent.can_view(auth) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'is_admin': node.has_permission(user, ADMIN),
'is_admin_parent': parent.is_admin_parent(user) if parent else False,
'can_edit': (node.can_edit(auth)
and not node.is_registration),
'has_read_permissions': node.has_permission(user, READ),
'permissions': node.get_permissions(user) if user else [],
'is_watching': user.is_watching(node) if user else False,
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
'dashboard_id': bookmark_collection_id,
'institutions': get_affiliated_institutions(user) if user else [],
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': [
{'value': key, 'display_name': value}
for key, value in settings.NODE_CATEGORY_MAP.iteritems()
]
}
return data
def _get_summary(node,
auth,
rescale_ratio,
primary=True,
link_id=None,
show_path=False):
# TODO(sloria): Refactor this or remove (lots of duplication with _view_project)
summary = {
'id':
link_id if link_id else node._id,
'primary':
primary,
'is_registration':
node.is_registration,
'is_fork':
node.is_fork,
'is_retracted':
node.is_retracted,
'pending_retraction':
node.pending_retraction,
'embargo_end_date':
node.embargo_end_date.strftime("%A, %b. %d, %Y")
if node.embargo_end_date else False,
'pending_embargo':
node.pending_embargo,
'archiving':
node.archiving,
}
if node.can_view(auth):
summary.update({
'can_view':
True,
'can_edit':
node.can_edit(auth),
'primary_id':
node._id,
'url':
node.url,
'primary':
primary,
'api_url':
node.api_url,
'title':
node.title,
'category':
node.category,
'node_type':
node.project_or_component,
'is_fork':
node.is_fork,
'is_registration':
node.is_registration,
'anonymous':
has_anonymous_link(node, auth),
'registered_date':
node.registered_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_registration else None,
'forked_date':
node.forked_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_fork else None,
'nlogs':
None,
'ua_count':
None,
'ua':
None,
'non_ua':
None,
'addons_enabled':
node.get_addon_names(),
'is_public':
node.is_public,
'parent_title':
node.parent_node.title if node.parent_node else None,
'parent_is_public':
node.parent_node.is_public if node.parent_node else False,
'show_path':
show_path
})
if rescale_ratio:
ua_count, ua, non_ua = _get_user_activity(node, auth,
rescale_ratio)
summary.update({
'nlogs': len(node.logs),
'ua_count': ua_count,
'ua': ua,
'non_ua': non_ua,
})
else:
summary['can_view'] = False
# TODO: Make output format consistent with _view_project
return {
'summary': summary,
}
def serialize_node_summary(node, auth, primary=True, show_path=False):
is_registration = node.is_registration
summary = {
'id': node._id,
'primary': primary,
'is_registration': node.is_registration,
'is_fork': node.is_fork,
'is_pending_registration': node.is_pending_registration if is_registration else False,
'is_retracted': node.is_retracted if is_registration else False,
'is_pending_retraction': node.is_pending_retraction if is_registration else False,
'embargo_end_date': node.embargo_end_date.strftime('%A, %b. %d, %Y') if is_registration and node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo if is_registration else False,
'is_embargoed': node.is_embargoed if is_registration else False,
'archiving': node.archiving if is_registration else False,
}
parent_node = node.parent_node
user = auth.user
if node.can_view(auth):
# Re-query node with contributor guids included to prevent N contributor queries
node = AbstractNode.objects.filter(pk=node.pk).include('contributor__user__guids').get()
contributor_data = serialize_contributors_for_summary(node)
summary.update({
'can_view': True,
'can_edit': node.can_edit(auth),
'primary_id': node._id,
'url': node.url,
'primary': primary,
'api_url': node.api_url,
'title': node.title,
'category': node.category,
'isPreprint': bool(node.preprint_file_id),
'childExists': Node.objects.get_children(node, active=True).exists(),
'is_admin': node.has_permission(user, permissions.ADMIN),
'is_contributor': node.is_contributor(user),
'logged_in': auth.logged_in,
'node_type': node.project_or_component,
'is_fork': node.is_fork,
'is_registration': is_registration,
'anonymous': has_anonymous_link(node, auth),
'registered_date': node.registered_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_registration
else None,
'forked_date': node.forked_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_fork
else None,
'ua_count': None,
'ua': None,
'non_ua': None,
'is_public': node.is_public,
'parent_title': parent_node.title if parent_node else None,
'parent_is_public': parent_node.is_public if parent_node else False,
'show_path': show_path,
'contributors': contributor_data['contributors'],
'others_count': contributor_data['others_count'],
'description': node.description if len(node.description) <= 150 else node.description[0:150] + '...',
})
else:
summary['can_view'] = False
return summary
def project_wiki_view(auth, wname, path=None, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
wiki_name = (wname or '').strip()
wiki_key = to_mongo_key(wiki_name)
wiki_page = WikiPage.objects.get_for_node(node, wiki_name)
wiki_version = WikiVersion.objects.get_for_node(node, wiki_name)
wiki_settings = node.get_addon('wiki')
can_edit = (auth.logged_in and not node.is_registration
and (node.has_permission(auth.user, WRITE)
or wiki_settings.is_publicly_editable))
versions = _get_wiki_versions(node, wiki_name, anonymous=anonymous)
# Determine panels used in view
panels = {'view', 'edit', 'compare', 'menu'}
if request.args and set(request.args).intersection(panels):
panels_used = [panel for panel in request.args if panel in panels]
num_columns = len(
set(panels_used).intersection({'view', 'edit', 'compare'}))
if num_columns == 0:
panels_used.append('view')
num_columns = 1
else:
panels_used = ['view', 'menu']
num_columns = 1
try:
view = wiki_utils.format_wiki_version(
version=request.args.get('view'),
num_versions=len(versions),
allow_preview=True,
)
compare = wiki_utils.format_wiki_version(
version=request.args.get('compare'),
num_versions=len(versions),
allow_preview=False,
)
except InvalidVersionError:
raise WIKI_INVALID_VERSION_ERROR
# ensure home is always lower case since it cannot be renamed
if wiki_name.lower() == 'home':
wiki_name = 'home'
if wiki_version:
version = wiki_version.identifier
is_current = wiki_version.is_current
content = wiki_version.html(node)
rendered_before_update = wiki_version.rendered_before_update
else:
version = 'NA'
is_current = False
content = ''
rendered_before_update = False
if can_edit:
if wiki_key not in node.wiki_private_uuids:
wiki_utils.generate_private_uuid(node, wiki_name)
sharejs_uuid = wiki_utils.get_sharejs_uuid(node, wiki_name)
else:
if not wiki_page and wiki_key != 'home':
raise WIKI_PAGE_NOT_FOUND_ERROR
if 'edit' in request.args:
if wiki_settings.is_publicly_editable:
raise HTTPError(http_status.HTTP_401_UNAUTHORIZED)
if node.can_view(auth):
return redirect(
node.web_url_for('project_wiki_view',
wname=wname,
_guid=True))
raise HTTPError(http_status.HTTP_403_FORBIDDEN)
sharejs_uuid = None
# Opens 'edit' panel when home wiki is empty
if not content and can_edit and wiki_name == 'home':
panels_used.append('edit')
# Default versions for view and compare
version_settings = {
'view': view or ('preview' if 'edit' in panels_used else 'current'),
'compare': compare or 'previous',
}
ret = {
'wiki_id': wiki_page._primary_key if wiki_page else None,
'wiki_name': wiki_page.page_name if wiki_page else wiki_name,
'wiki_content': content,
'rendered_before_update': rendered_before_update,
'page': wiki_page,
'version': version,
'versions': versions,
'sharejs_uuid': sharejs_uuid or '',
'sharejs_url': settings.SHAREJS_URL,
'is_current': is_current,
'version_settings': version_settings,
'pages_current': _get_wiki_pages_latest(node),
'category': node.category,
'panels_used': panels_used,
'num_columns': num_columns,
'urls': {
'api':
_get_wiki_api_urls(
node, wiki_name, {
'content':
node.api_url_for('wiki_page_content', wname=wiki_name),
'draft':
node.api_url_for('wiki_page_draft', wname=wiki_name),
}),
'web':
_get_wiki_web_urls(node, wiki_name),
'profile_image':
get_profile_image_url(auth.user, 25),
},
}
ret.update(_view_project(node, auth, primary=True))
ret['user']['can_edit_wiki_body'] = can_edit
return ret
def project_wiki_view(auth, wname, path=None, **kwargs):
node = kwargs["node"] or kwargs["project"]
anonymous = has_anonymous_link(node, auth)
wiki_name = (wname or "").strip()
wiki_key = to_mongo_key(wiki_name)
wiki_page = node.get_wiki_page(wiki_name)
wiki_settings = node.get_addon("wiki")
can_edit = (
auth.logged_in
and not node.is_registration
and (node.has_permission(auth.user, "write") or wiki_settings.is_publicly_editable)
)
versions = _get_wiki_versions(node, wiki_name, anonymous=anonymous)
# Determine panels used in view
panels = {"view", "edit", "compare", "menu"}
if request.args and set(request.args).intersection(panels):
panels_used = [panel for panel in request.args if panel in panels]
num_columns = len(set(panels_used).intersection({"view", "edit", "compare"}))
if num_columns == 0:
panels_used.append("view")
num_columns = 1
else:
panels_used = ["view", "menu"]
num_columns = 1
try:
view = wiki_utils.format_wiki_version(
version=request.args.get("view"), num_versions=len(versions), allow_preview=True
)
compare = wiki_utils.format_wiki_version(
version=request.args.get("compare"), num_versions=len(versions), allow_preview=False
)
except InvalidVersionError:
raise WIKI_INVALID_VERSION_ERROR
# Default versions for view and compare
version_settings = {
"view": view or ("preview" if "edit" in panels_used else "current"),
"compare": compare or "previous",
}
# ensure home is always lower case since it cannot be renamed
if wiki_name.lower() == "home":
wiki_name = "home"
if wiki_page:
version = wiki_page.version
is_current = wiki_page.is_current
content = wiki_page.html(node)
use_python_render = wiki_page.rendered_before_update
else:
version = "NA"
is_current = False
content = ""
use_python_render = False
if can_edit:
if wiki_key not in node.wiki_private_uuids:
wiki_utils.generate_private_uuid(node, wiki_name)
sharejs_uuid = wiki_utils.get_sharejs_uuid(node, wiki_name)
else:
if wiki_key not in node.wiki_pages_current and wiki_key != "home":
raise WIKI_PAGE_NOT_FOUND_ERROR
if "edit" in request.args:
if wiki_settings.is_publicly_editable:
raise HTTPError(http.UNAUTHORIZED)
raise HTTPError(http.FORBIDDEN)
sharejs_uuid = None
ret = {
"wiki_id": wiki_page._primary_key if wiki_page else None,
"wiki_name": wiki_page.page_name if wiki_page else wiki_name,
"wiki_content": content,
"use_python_render": use_python_render,
"page": wiki_page,
"version": version,
"versions": versions,
"sharejs_uuid": sharejs_uuid or "",
"sharejs_url": settings.SHAREJS_URL,
"is_current": is_current,
"version_settings": version_settings,
"pages_current": _get_wiki_pages_current(node),
"category": node.category,
"panels_used": panels_used,
"num_columns": num_columns,
"urls": {
"api": _get_wiki_api_urls(
node,
wiki_name,
{
"content": node.api_url_for("wiki_page_content", wname=wiki_name),
"draft": node.api_url_for("wiki_page_draft", wname=wiki_name),
},
),
"web": _get_wiki_web_urls(node, wiki_name),
"gravatar": get_gravatar(auth.user, 25),
},
}
ret.update(_view_project(node, auth, primary=True))
ret["user"]["can_edit_wiki_body"] = can_edit
return ret
def _view_project(node, auth, primary=False,
embed_contributors=False, embed_descendants=False,
embed_registrations=False, embed_forks=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
node = Node.objects.filter(pk=node.pk).include('contributor__user__guids').get()
user = auth.user
parent = node.find_readable_antecedent(auth)
if user:
bookmark_collection = find_bookmark_collection(user)
bookmark_collection_id = bookmark_collection._id
in_bookmark_collection = bookmark_collection.linked_nodes.filter(pk=node.pk).exists()
else:
in_bookmark_collection = False
bookmark_collection_id = ''
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
disapproval_link = ''
if (node.is_pending_registration and node.has_permission(user, ADMIN)):
disapproval_link = node.root.registration_approval.stashed_urls.get(user._id, {}).get('reject', '')
if (node.is_pending_embargo and node.has_permission(user, ADMIN)):
disapproval_link = node.root.embargo.stashed_urls.get(user._id, {}).get('reject', '')
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, kind='info', dismissible=False, trust=True)
data = {
'node': {
'disapproval_link': disapproval_link,
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'category_short': node.category,
'node_type': node.project_or_component,
'description': node.description or '',
'license': serialize_node_license_record(node.license),
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'update_url': node.api_url_for('update_node'),
'in_dashboard': in_bookmark_collection,
'is_public': node.is_public,
'is_archiving': node.archiving,
'date_created': iso8601format(node.date_created),
'date_modified': iso8601format(node.logs.latest().date) if node.logs.exists() else '',
'tags': list(node.tags.filter(system=False).values_list('name', flat=True)),
'children': bool(node.nodes_active),
'is_registration': node.is_registration,
'is_pending_registration': node.is_pending_registration,
'is_retracted': node.is_retracted,
'is_pending_retraction': node.is_pending_retraction,
'retracted_justification': getattr(node.retraction, 'justification', None),
'date_retracted': iso8601format(getattr(node.retraction, 'date_retracted', None)),
'embargo_end_date': node.embargo_end_date.strftime('%A, %b. %d, %Y') if node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo,
'is_embargoed': node.is_embargoed,
'is_pending_embargo_termination': node.is_embargoed and (
node.embargo_termination_approval and
node.embargo_termination_approval.is_pending_approval
),
'registered_from_url': node.registered_from.url if node.is_registration else '',
'registered_date': iso8601format(node.registered_date) if node.is_registration else '',
'root_id': node.root._id if node.root else None,
'registered_meta': node.registered_meta,
'registered_schemas': serialize_meta_schemas(list(node.registered_schema.all())),
'registration_count': node.registrations_all.count(),
'is_fork': node.is_fork,
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': node.forks.filter(is_deleted=False).count(),
'templated_count': node.templated_list.count(),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'anonymous': anonymous,
'points': len(node.get_points(deleted=False, folders=False)),
'comment_level': node.comment_level,
'has_comments': bool(Comment.find(Q('node', 'eq', node))),
'has_children': bool(Comment.find(Q('node', 'eq', node))),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
'institutions': get_affiliated_institutions(node) if node else [],
'alternative_citations': [citation.to_json() for citation in node.alternative_citations.all()],
'has_draft_registrations': node.has_active_draft_registrations,
'contributors': list(node.contributors.values_list('guids___id', flat=True)),
'is_preprint': node.is_preprint,
'is_preprint_orphan': node.is_preprint_orphan,
'has_published_preprint': node.preprints.filter(is_published=True).exists() if node else False,
'preprint_file_id': node.preprint_file._id if node.preprint_file else None,
'preprint_url': node.preprint_url
},
'parent_node': {
'exists': parent is not None,
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'category': parent.category_display if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'registrations_url': parent.web_url_for('node_registrations') if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': parent.can_view(auth) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'is_admin': node.has_permission(user, ADMIN),
'is_admin_parent': parent.is_admin_parent(user) if parent else False,
'can_edit': (node.can_edit(auth)
and not node.is_registration),
'has_read_permissions': node.has_permission(user, READ),
'permissions': node.get_permissions(user) if user else [],
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
'dashboard_id': bookmark_collection_id,
'institutions': get_affiliated_institutions(user) if user else [],
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': [
{'value': key, 'display_name': value}
for key, value in settings.NODE_CATEGORY_MAP.iteritems()
]
}
if embed_contributors and not anonymous:
data['node']['contributors'] = utils.serialize_visible_contributors(node)
if embed_descendants:
descendants, all_readable = _get_readable_descendants(auth=auth, node=node)
data['user']['can_sort'] = all_readable
data['node']['descendants'] = [
serialize_node_summary(node=each, auth=auth, primary=not node.has_node_link_to(each), show_path=False)
for each in descendants
]
if embed_registrations:
data['node']['registrations'] = [
serialize_node_summary(node=each, auth=auth, show_path=False)
for each in node.registrations_all.order_by('-registered_date').exclude(is_deleted=True).annotate(nlogs=Count('logs'))
]
if embed_forks:
data['node']['forks'] = [
serialize_node_summary(node=each, auth=auth, show_path=False)
for each in node.forks.exclude(type='osf.registration').exclude(is_deleted=True).order_by('-forked_date').annotate(nlogs=Count('logs'))
]
return data
def github_view_file(auth, **kwargs):
node = kwargs['node'] or kwargs['project']
node_settings = kwargs['node_addon']
path = get_path(kwargs)
file_name = os.path.split(path)[1]
# Get branch / commit
branch = request.args.get('branch')
sha = request.args.get('sha', branch)
ref = sha or branch
connection = GitHub.from_settings(node_settings.user_settings)
# Get current file for delete url
current_file = connection.contents(user=node_settings.user,
repo=node_settings.repo,
path=path,
ref=sha or branch)
anonymous = has_anonymous_link(node, auth)
try:
# If GUID has already been created, we won't redirect, and can check
# whether the file exists below
guid = GithubGuidFile.find_one(
Q('node', 'eq', node) & Q('path', 'eq', path))
except ModularOdmException:
# If GUID doesn't exist, check whether file exists before creating
commits = connection.history(
node_settings.user,
node_settings.repo,
path,
ref,
)
if not commits:
raise HTTPError(http.NOT_FOUND)
guid = GithubGuidFile(
node=node,
path=path,
)
guid.save()
redirect_url = check_file_guid(guid)
if redirect_url:
return redirect(redirect_url)
# Get default branch if neither SHA nor branch is provided
if ref is None:
repo = connection.repo(node_settings.user, node_settings.repo)
ref = branch = repo.default_branch
# Get file history; use SHA or branch if registered, else branch
start_sha = ref if node.is_registration else branch
commits = connection.history(node_settings.user,
node_settings.repo,
path,
sha=start_sha)
# Get current commit
shas = [commit['sha'] for commit in commits]
if not shas:
raise HTTPError(http.NOT_FOUND)
current_sha = sha if sha in shas else shas[0]
# Get file URL
download_url = '/' + guid._id + '/download/' + ref_to_params(
branch, current_sha)
render_url = os.path.join(node.api_url, 'github', 'file', path,
'render') + '/' + ref_to_params(
branch, current_sha)
delete_url = None
if current_file:
delete_url = node.api_url_for('github_delete_file',
path=path) + ref_to_params(
branch, current_file.sha)
for commit in commits:
commit['download'] = ('/' + guid._id + '/download/' +
ref_to_params(sha=commit['sha']))
commit['view'] = ('/' + guid._id + '/' +
ref_to_params(branch, sha=commit['sha']))
if anonymous:
commit['name'] = 'A user'
commit['email'] = ''
# Get or create rendered file
cache_file_name = get_cache_file(
path,
current_sha,
)
rendered = get_cache_content(node_settings, cache_file_name)
if rendered is None:
try:
_, data, size = connection.file(
node_settings.user,
node_settings.repo,
path,
ref=sha,
)
except TooBigError:
rendered = 'File too large to download.'
if rendered is None:
# Skip if too large to be rendered.
if github_settings.MAX_RENDER_SIZE is not None and size > github_settings.MAX_RENDER_SIZE:
rendered = 'File too large to render; download file to view it.'
else:
rendered = get_cache_content(
node_settings,
cache_file_name,
start_render=True,
remote_path=guid.path,
file_content=data,
download_url=download_url,
)
rv = {
'node': {
'id': node._id,
'title': node.title
},
'file_name': file_name,
'files_page_url': node.web_url_for('collect_file_trees'),
'current_sha': current_sha,
'render_url': render_url,
'rendered': rendered,
'download_url': download_url,
'delete_url': delete_url,
'commits': commits,
}
rv.update(_view_project(node, auth, primary=True))
return rv
def serialize_node_summary(node, auth, primary=True, show_path=False):
is_registration = node.is_registration
summary = {
'id':
node._id,
'primary':
primary,
'is_registration':
node.is_registration,
'is_fork':
node.is_fork,
'is_pending_registration':
node.is_pending_registration if is_registration else False,
'is_retracted':
node.is_retracted if is_registration else False,
'is_pending_retraction':
node.is_pending_retraction if is_registration else False,
'embargo_end_date':
node.embargo_end_date.strftime('%A, %b. %d, %Y')
if is_registration and node.embargo_end_date else False,
'is_pending_embargo':
node.is_pending_embargo if is_registration else False,
'is_embargoed':
node.is_embargoed if is_registration else False,
'archiving':
node.archiving if is_registration else False,
}
parent_node = node.parent_node
user = auth.user
if node.can_view(auth):
# Re-query node with contributor guids included to prevent N contributor queries
node = AbstractNode.objects.filter(
pk=node.pk).include('contributor__user__guids').get()
contributor_data = serialize_contributors_for_summary(node)
summary.update({
'can_view':
True,
'can_edit':
node.can_edit(auth),
'primary_id':
node._id,
'url':
node.url,
'primary':
primary,
'api_url':
node.api_url,
'title':
node.title,
'category':
node.category,
'isPreprint':
bool(node.preprint_file_id),
'childExists':
Node.objects.get_children(node, active=True).exists(),
'is_admin':
node.has_permission(user, permissions.ADMIN),
'is_contributor':
node.is_contributor(user),
'logged_in':
auth.logged_in,
'node_type':
node.project_or_component,
'is_fork':
node.is_fork,
'is_registration':
is_registration,
'anonymous':
has_anonymous_link(node, auth),
'registered_date':
node.registered_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_registration else None,
'forked_date':
node.forked_date.strftime('%Y-%m-%d %H:%M UTC')
if node.is_fork else None,
'ua_count':
None,
'ua':
None,
'non_ua':
None,
'is_public':
node.is_public,
'parent_title':
parent_node.title if parent_node else None,
'parent_is_public':
parent_node.is_public if parent_node else False,
'show_path':
show_path,
'contributors':
contributor_data['contributors'],
'others_count':
contributor_data['others_count'],
'description':
node.description if len(node.description) <= 150 else
node.description[0:150] + '...',
})
else:
summary['can_view'] = False
return summary
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.parent_node
if user:
bookmark_collection = find_bookmark_collection(user)
bookmark_collection_id = bookmark_collection._id
in_bookmark_collection = bookmark_collection.pointing_at(node._primary_key) is not None
else:
in_bookmark_collection = False
bookmark_collection_id = ''
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
disapproval_link = ''
if (node.is_pending_registration and node.has_permission(user, ADMIN)):
disapproval_link = node.root.registration_approval.stashed_urls.get(user._id, {}).get('reject', '')
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, kind='info', dismissible=False, trust=True)
data = {
'node': {
'disapproval_link': disapproval_link,
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'category_short': node.category,
'node_type': node.project_or_component,
'description': node.description or '',
'license': serialize_node_license_record(node.license),
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'update_url': node.api_url_for('update_node'),
'in_dashboard': in_bookmark_collection,
'is_public': node.is_public,
'is_archiving': node.archiving,
'date_created': iso8601format(node.date_created),
'date_modified': iso8601format(node.logs[-1].date) if node.logs else '',
'tags': [tag._primary_key for tag in node.tags],
'children': bool(node.nodes_active),
'is_registration': node.is_registration,
'is_pending_registration': node.is_pending_registration,
'is_retracted': node.is_retracted,
'is_pending_retraction': node.is_pending_retraction,
'retracted_justification': getattr(node.retraction, 'justification', None),
'embargo_end_date': node.embargo_end_date.strftime("%A, %b. %d, %Y") if node.embargo_end_date else False,
'is_pending_embargo': node.is_pending_embargo,
'is_embargoed': node.is_embargoed,
'is_pending_embargo_termination': node.is_embargoed and (
node.embargo_termination_approval and
node.embargo_termination_approval.is_pending_approval
),
'registered_from_url': node.registered_from.url if node.is_registration else '',
'registered_date': iso8601format(node.registered_date) if node.is_registration else '',
'root_id': node.root._id if node.root else None,
'registered_meta': node.registered_meta,
'registered_schemas': serialize_meta_schemas(node.registered_schema),
'registration_count': node.registrations_all.count(),
'is_fork': node.is_fork,
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': node.forks.count(),
'templated_count': node.templated_list.count(),
'watched_count': node.watches.count(),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'anonymous': anonymous,
'points': len(node.get_points(deleted=False, folders=False)),
'piwik_site_id': node.piwik_site_id,
'comment_level': node.comment_level,
'has_comments': bool(Comment.find(Q('node', 'eq', node))),
'has_children': bool(Comment.find(Q('node', 'eq', node))),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
'institution': {
'name': node.primary_institution.name if node.primary_institution else None,
'logo_path': node.primary_institution.logo_path if node.primary_institution else None,
'id': node.primary_institution._id if node.primary_institution else None
},
'alternative_citations': [citation.to_json() for citation in node.alternative_citations],
'has_draft_registrations': node.has_active_draft_registrations,
'contributors': [contributor._id for contributor in node.contributors]
},
'parent_node': {
'exists': parent is not None,
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'category': parent.category_display if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'registrations_url': parent.web_url_for('node_registrations') if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': parent.can_view(auth) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'is_admin': node.has_permission(user, ADMIN),
'is_admin_parent': parent.is_admin_parent(user) if parent else False,
'can_edit': (node.can_edit(auth)
and not node.is_registration),
'has_read_permissions': node.has_permission(user, READ),
'permissions': node.get_permissions(user) if user else [],
'is_watching': user.is_watching(node) if user else False,
'piwik_token': user.piwik_token if user else '',
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
'dashboard_id': bookmark_collection_id,
'institutions': get_affiliated_institutions(user) if user else [],
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': Node.CATEGORY_MAP
}
return data
def _view_project(node, auth, primary=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
user = auth.user
parent = node.parent_node
if user:
dashboard = find_dashboard(user)
dashboard_id = dashboard._id
in_dashboard = dashboard.pointing_at(node._primary_key) is not None
else:
in_dashboard = False
dashboard_id = ''
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
widgets, configs, js, css = _render_addon(node)
redirect_url = node.url + '?view_only=None'
# Before page load callback; skip if not primary call
if primary:
for addon in node.get_addons():
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, dismissible=False)
data = {
'node': {
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'category_short': node.category,
'node_type': node.project_or_component,
'description': node.description or '',
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'update_url': node.api_url_for('update_node'),
'in_dashboard': in_dashboard,
'is_public': node.is_public,
'date_created': iso8601format(node.date_created),
'date_modified': iso8601format(node.logs[-1].date) if node.logs else '',
'tags': [tag._primary_key for tag in node.tags],
'children': bool(node.nodes),
'is_registration': node.is_registration,
'registered_from_url': node.registered_from.url if node.is_registration else '',
'registered_date': iso8601format(node.registered_date) if node.is_registration else '',
'registered_meta': [
{
'name_no_ext': from_mongo(meta),
'name_clean': clean_template_name(meta),
}
for meta in node.registered_meta or []
],
'registration_count': len(node.node__registrations),
'is_fork': node.is_fork,
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': len(node.forks),
'templated_count': len(node.templated_list),
'watched_count': len(node.watchconfig__watched),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'anonymous': anonymous,
'points': len(node.get_points(deleted=False, folders=False)),
'piwik_site_id': node.piwik_site_id,
'comment_level': node.comment_level,
'has_comments': bool(getattr(node, 'commented', [])),
'has_children': bool(getattr(node, 'commented', False)),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
},
'parent_node': {
'exists': parent is not None,
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'category': parent.category_display if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'registrations_url': parent.web_url_for('node_registrations') if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': parent.can_view(auth) if parent else False
},
'user': {
'is_contributor': node.is_contributor(user),
'is_admin_parent': parent.is_admin_parent(user) if parent else False,
'can_edit': (node.can_edit(auth)
and not node.is_registration),
'has_read_permissions': node.has_permission(user, 'read'),
'permissions': node.get_permissions(user) if user else [],
'is_watching': user.is_watching(node) if user else False,
'piwik_token': user.piwik_token if user else '',
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, user),
'dashboard_id': dashboard_id,
},
'badges': _get_badge(user),
# TODO: Namespace with nested dicts
'addons_enabled': node.get_addon_names(),
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': Node.CATEGORY_MAP,
}
return data
def _view_project(node, auth, primary=False,
embed_contributors=False, embed_descendants=False,
embed_registrations=False, embed_forks=False):
"""Build a JSON object containing everything needed to render
project.view.mako.
"""
node = AbstractNode.objects.filter(pk=node.pk).include('contributor__user__guids').get()
user = auth.user
try:
contributor = node.contributor_set.get(user=user)
except Contributor.DoesNotExist:
contributor = None
parent = node.find_readable_antecedent(auth)
if user:
bookmark_collection = find_bookmark_collection(user)
bookmark_collection_id = bookmark_collection._id
in_bookmark_collection = bookmark_collection.guid_links.filter(_id=node._id).exists()
else:
in_bookmark_collection = False
bookmark_collection_id = ''
view_only_link = auth.private_key or request.args.get('view_only', '').strip('/')
anonymous = has_anonymous_link(node, auth)
addons = list(node.get_addons())
widgets, configs, js, css = _render_addons(addons)
redirect_url = node.url + '?view_only=None'
disapproval_link = ''
if (node.is_pending_registration and node.has_permission(user, ADMIN)):
disapproval_link = node.root.registration_approval.stashed_urls.get(user._id, {}).get('reject', '')
if (node.is_pending_embargo and node.has_permission(user, ADMIN)):
disapproval_link = node.root.embargo.stashed_urls.get(user._id, {}).get('reject', '')
# Before page load callback; skip if not primary call
if primary:
for addon in addons:
messages = addon.before_page_load(node, user) or []
for message in messages:
status.push_status_message(message, kind='info', dismissible=False, trust=True)
NodeRelation = apps.get_model('osf.NodeRelation')
is_registration = node.is_registration
data = {
'node': {
'disapproval_link': disapproval_link,
'id': node._primary_key,
'title': node.title,
'category': node.category_display,
'category_short': node.category,
'node_type': node.project_or_component,
'description': node.description or '',
'license': serialize_node_license_record(node.license),
'url': node.url,
'api_url': node.api_url,
'absolute_url': node.absolute_url,
'redirect_url': redirect_url,
'display_absolute_url': node.display_absolute_url,
'update_url': node.api_url_for('update_node'),
'in_dashboard': in_bookmark_collection,
'is_public': node.is_public,
'is_archiving': node.archiving,
'date_created': iso8601format(node.created),
'date_modified': iso8601format(node.last_logged) if node.last_logged else '',
'tags': list(node.tags.filter(system=False).values_list('name', flat=True)),
'children': node.nodes_active.exists(),
'child_exists': Node.objects.get_children(node, active=True).exists(),
'is_supplemental_project': node.has_linked_published_preprints,
'is_registration': is_registration,
'is_pending_registration': node.is_pending_registration if is_registration else False,
'is_retracted': node.is_retracted if is_registration else False,
'is_pending_retraction': node.is_pending_retraction if is_registration else False,
'retracted_justification': getattr(node.retraction, 'justification', None) if is_registration else None,
'date_retracted': iso8601format(getattr(node.retraction, 'date_retracted', None)) if is_registration else '',
'embargo_end_date': node.embargo_end_date.strftime('%A, %b %d, %Y') if is_registration and node.embargo_end_date else '',
'is_pending_embargo': node.is_pending_embargo if is_registration else False,
'is_embargoed': node.is_embargoed if is_registration else False,
'is_pending_embargo_termination': is_registration and node.is_embargoed and (
node.embargo_termination_approval and
node.embargo_termination_approval.is_pending_approval
),
'registered_from_url': node.registered_from.url if is_registration else '',
'registered_date': iso8601format(node.registered_date) if is_registration else '',
'root_id': node.root._id if node.root else None,
'registered_meta': node.registered_meta,
'registered_schemas': serialize_meta_schemas(list(node.registered_schema.all())) if is_registration else False,
'is_fork': node.is_fork,
'is_collected': node.is_collected,
'collections': serialize_collections(node.collecting_metadata_list, auth),
'forked_from_id': node.forked_from._primary_key if node.is_fork else '',
'forked_from_display_absolute_url': node.forked_from.display_absolute_url if node.is_fork else '',
'forked_date': iso8601format(node.forked_date) if node.is_fork else '',
'fork_count': node.forks.exclude(type='osf.registration').filter(is_deleted=False).count(),
'private_links': [x.to_json() for x in node.private_links_active],
'link': view_only_link,
'templated_count': node.templated_list.count(),
'linked_nodes_count': NodeRelation.objects.filter(child=node, is_node_link=True).exclude(parent__type='osf.collection').count(),
'anonymous': anonymous,
'comment_level': node.comment_level,
'has_comments': node.comment_set.exists(),
'identifiers': {
'doi': node.get_identifier_value('doi'),
'ark': node.get_identifier_value('ark'),
},
'visible_preprints': serialize_preprints(node, user),
'institutions': get_affiliated_institutions(node) if node else [],
'has_draft_registrations': node.has_active_draft_registrations,
'access_requests_enabled': node.access_requests_enabled,
'storage_location': node.osfstorage_region.name,
'waterbutler_url': node.osfstorage_region.waterbutler_url,
'mfr_url': node.osfstorage_region.mfr_url
},
'parent_node': {
'exists': parent is not None,
'id': parent._primary_key if parent else '',
'title': parent.title if parent else '',
'category': parent.category_display if parent else '',
'url': parent.url if parent else '',
'api_url': parent.api_url if parent else '',
'absolute_url': parent.absolute_url if parent else '',
'registrations_url': parent.web_url_for('node_registrations', _guid=True) if parent else '',
'is_public': parent.is_public if parent else '',
'is_contributor': parent.is_contributor(user) if parent else '',
'can_view': parent.can_view(auth) if parent else False,
},
'user': {
'is_contributor': bool(contributor),
'is_admin': bool(contributor) and contributor.admin,
'is_admin_parent': parent.is_admin_parent(user) if parent else False,
'can_edit': bool(contributor) and contributor.write and not node.is_registration,
'can_edit_tags': bool(contributor) and contributor.write,
'has_read_permissions': node.has_permission(user, READ),
'permissions': get_contributor_permissions(contributor, as_list=True) if contributor else [],
'id': user._id if user else None,
'username': user.username if user else None,
'fullname': user.fullname if user else '',
'can_comment': bool(contributor) or node.can_comment(auth),
'show_wiki_widget': _should_show_wiki_widget(node, contributor),
'dashboard_id': bookmark_collection_id,
'institutions': get_affiliated_institutions(user) if user else [],
},
# TODO: Namespace with nested dicts
'addons_enabled': [each.short_name for each in addons],
'addons': configs,
'addon_widgets': widgets,
'addon_widget_js': js,
'addon_widget_css': css,
'node_categories': [
{'value': key, 'display_name': value}
for key, value in settings.NODE_CATEGORY_MAP.items()
]
}
# Default should be at top of list for UI and for the project overview page the default region
# for a component is that of the it's parent node.
region_list = get_storage_region_list(user, node=node)
data.update({'storage_regions': region_list})
data.update({'storage_flag_is_active': storage_i18n_flag_active()})
if embed_contributors and not anonymous:
data['node']['contributors'] = utils.serialize_visible_contributors(node)
else:
data['node']['contributors'] = list(node.contributors.values_list('guids___id', flat=True))
if embed_descendants:
descendants, all_readable = _get_readable_descendants(auth=auth, node=node)
data['user']['can_sort'] = all_readable
data['node']['descendants'] = [
serialize_node_summary(node=each, auth=auth, primary=not node.has_node_link_to(each), show_path=False)
for each in descendants
]
if embed_registrations:
data['node']['registrations'] = [
serialize_node_summary(node=each, auth=auth, show_path=False)
for each in node.registrations_all.order_by('-registered_date').exclude(is_deleted=True)
]
if embed_forks:
data['node']['forks'] = [
serialize_node_summary(node=each, auth=auth, show_path=False)
for each in node.forks.exclude(type='osf.registration').exclude(is_deleted=True).order_by('-forked_date')
]
return data
def figshare_view_file(*args, **kwargs):
auth = kwargs['auth']
node = kwargs['node'] or kwargs['project']
node_settings = kwargs['node_addon']
article_id = kwargs.get('aid') or None
file_id = kwargs.get('fid') or None
anonymous = has_anonymous_link(node, auth)
if not article_id or not file_id:
raise HTTPError(http.NOT_FOUND)
connect = Figshare.from_settings(node_settings.user_settings)
if node_settings.figshare_type == 'project':
item = connect.project(node_settings, node_settings.figshare_id)
else:
item = connect.article(node_settings, node_settings.figshare_id)
if article_id not in str(item):
raise HTTPError(http.NOT_FOUND)
article = connect.article(node_settings, article_id)
found = False
for f in article['items'][0]['files']:
if f['id'] == int(file_id):
found = f
break
if not found:
raise HTTPError(http.NOT_FOUND)
try:
# If GUID has already been created, we won't redirect, and can check
# whether the file exists below
guid = FigShareGuidFile.find_one(
Q('node', 'eq', node) &
Q('article_id', 'eq', article_id) &
Q('file_id', 'eq', file_id)
)
except:
guid = FigShareGuidFile(node=node, article_id=article_id, file_id=file_id)
guid.save()
redirect_url = check_file_guid(guid)
if redirect_url:
return redirect(redirect_url)
private = not(article['items'][0]['status'] == 'Public')
figshare_url = 'http://figshare.com/'
if private:
figshare_url += 'preview/_preview/{0}'.format(article['items'][0]['article_id'])
else:
figshare_url += 'articles/{0}/{1}'.format(article['items'][0]['title'].replace(' ', '_'), article['items'][0]['article_id'])
version_url = "http://figshare.com/articles/{filename}/{file_id}".format(
filename=article['items'][0]['title'], file_id=article['items'][0]['article_id'])
download_url = node.api_url + 'figshare/download/article/{aid}/file/{fid}'.format(aid=article_id, fid=file_id)
render_url = node.api_url + \
'figshare/render/article/{aid}/file/{fid}'.format(aid=article_id, fid=file_id)
delete_url = node.api_url + 'figshare/article/{aid}/file/{fid}/'.format(aid=article_id, fid=file_id)
filename = found['name']
cache_file_name = get_cache_file(
article_id, file_id
)
rendered = get_cache_content(node_settings, cache_file_name)
if private:
rendered = messages.FIGSHARE_VIEW_FILE_PRIVATE.format(url='http://figshare.com/')
elif rendered is None:
filename, size, filedata = connect.get_file(node_settings, found)
if figshare_settings.MAX_RENDER_SIZE is not None and size > figshare_settings.MAX_RENDER_SIZE:
rendered = messages.FIGSHARE_VIEW_FILE_OVERSIZED.format(
url=found.get('download_url'))
else:
rendered = get_cache_content(
node_settings,
cache_file_name,
start_render=True,
remote_path=filename,
file_content=filedata,
download_url=download_url,
)
categories = connect.categories()['items'] # TODO Cache this
categories = ''.join(
["<option value='{val}'>{label}</option>".format(val=i['id'], label=i['name']) for i in categories])
rv = {
'node': {
'id': node._id,
'title': node.title
},
'file_name': filename,
'rendered': rendered,
'file_status': article['items'][0]['status'],
'file_version': article['items'][0]['version'],
'doi': 'http://dx.doi.org/10.6084/m9.figshare.{0}'.format(article['items'][0]['article_id']),
'parent_type': 'fileset' if article['items'][0]['defined_type'] == 'fileset' else 'singlefile',
'parent_id': article['items'][0]['article_id'],
'figshare_categories': categories,
'figshare_title': article['items'][0]['title'],
'figshare_desc': article['items'][0]['description'],
'urls': {
'render': render_url,
'download': found.get('download_url'),
'version': version_url,
'figshare': privacy_info_handle(figshare_url, anonymous),
'delete': delete_url,
'files': node.web_url_for('collect_file_trees')
}
}
rv.update(_view_project(node, auth, primary=True))
return rv
def figshare_view_file(*args, **kwargs):
auth = kwargs['auth']
node = kwargs['node'] or kwargs['project']
node_settings = kwargs['node_addon']
article_id = kwargs.get('aid') or None
file_id = kwargs.get('fid') or None
anonymous = has_anonymous_link(node, auth)
if not article_id or not file_id:
raise HTTPError(http.NOT_FOUND)
connect = Figshare.from_settings(node_settings.user_settings)
if node_settings.figshare_type == 'project':
item = connect.project(node_settings, node_settings.figshare_id)
else:
item = connect.article(node_settings, node_settings.figshare_id)
if article_id not in str(item):
raise HTTPError(http.NOT_FOUND)
article = connect.article(node_settings, article_id)
found = False
for f in article['items'][0]['files']:
if f['id'] == int(file_id):
found = f
break
if not found:
raise HTTPError(http.NOT_FOUND)
try:
# If GUID has already been created, we won't redirect, and can check
# whether the file exists below
guid = FigShareGuidFile.find_one(
Q('node', 'eq', node) & Q('article_id', 'eq', article_id)
& Q('file_id', 'eq', file_id))
except:
guid = FigShareGuidFile(node=node,
article_id=article_id,
file_id=file_id)
guid.save()
redirect_url = check_file_guid(guid)
if redirect_url:
return redirect(redirect_url)
private = not (article['items'][0]['status'] == 'Public')
figshare_url = 'http://figshare.com/'
if private:
figshare_url += 'preview/_preview/{0}'.format(
article['items'][0]['article_id'])
else:
figshare_url += 'articles/{0}/{1}'.format(
article['items'][0]['title'].replace(' ', '_'),
article['items'][0]['article_id'])
version_url = "http://figshare.com/articles/{filename}/{file_id}".format(
filename=article['items'][0]['title'],
file_id=article['items'][0]['article_id'])
download_url = node.api_url + 'figshare/download/article/{aid}/file/{fid}'.format(
aid=article_id, fid=file_id)
render_url = node.api_url + \
'figshare/render/article/{aid}/file/{fid}'.format(aid=article_id, fid=file_id)
delete_url = node.api_url + 'figshare/article/{aid}/file/{fid}/'.format(
aid=article_id, fid=file_id)
filename = found['name']
cache_file_name = get_cache_file(article_id, file_id)
rendered = get_cache_content(node_settings, cache_file_name)
if private:
rendered = messages.FIGSHARE_VIEW_FILE_PRIVATE.format(
url='http://figshare.com/')
elif rendered is None:
filename, size, filedata = connect.get_file(node_settings, found)
if figshare_settings.MAX_RENDER_SIZE is not None and size > figshare_settings.MAX_RENDER_SIZE:
rendered = messages.FIGSHARE_VIEW_FILE_OVERSIZED.format(
url=found.get('download_url'))
else:
rendered = get_cache_content(
node_settings,
cache_file_name,
start_render=True,
remote_path=filename,
file_content=filedata,
download_url=download_url,
)
categories = connect.categories()['items'] # TODO Cache this
categories = ''.join([
"<option value='{val}'>{label}</option>".format(val=i['id'],
label=i['name'])
for i in categories
])
rv = {
'node': {
'id': node._id,
'title': node.title
},
'file_name':
filename,
'rendered':
rendered,
'file_status':
article['items'][0]['status'],
'file_version':
article['items'][0]['version'],
'doi':
'http://dx.doi.org/10.6084/m9.figshare.{0}'.format(
article['items'][0]['article_id']),
'parent_type':
'fileset'
if article['items'][0]['defined_type'] == 'fileset' else 'singlefile',
'parent_id':
article['items'][0]['article_id'],
'figshare_categories':
categories,
'figshare_title':
article['items'][0]['title'],
'figshare_desc':
article['items'][0]['description'],
'urls': {
'render': render_url,
'download': found.get('download_url'),
'version': version_url,
'figshare': privacy_info_handle(figshare_url, anonymous),
'delete': delete_url,
'files': node.web_url_for('collect_file_trees')
}
}
rv.update(_view_project(node, auth, primary=True))
return rv
def project_wiki_view(auth, wname, path=None, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
wiki_name = (wname or '').strip()
wiki_key = to_mongo_key(wiki_name)
wiki_page = node.get_wiki_page(wiki_name)
wiki_settings = node.get_addon('wiki')
can_edit = (
auth.logged_in
and not node.is_registration
and (
node.has_permission(auth.user, 'write')
or wiki_settings.is_publicly_editable
)
)
versions = _get_wiki_versions(node, wiki_name, anonymous=anonymous)
# Determine panels used in view
panels = {'view', 'edit', 'compare', 'menu'}
if request.args and set(request.args).intersection(panels):
panels_used = [panel for panel in request.args if panel in panels]
num_columns = len(set(panels_used).intersection({'view', 'edit', 'compare'}))
if num_columns == 0:
panels_used.append('view')
num_columns = 1
else:
panels_used = ['view', 'menu']
num_columns = 1
try:
view = wiki_utils.format_wiki_version(
version=request.args.get('view'),
num_versions=len(versions),
allow_preview=True,
)
compare = wiki_utils.format_wiki_version(
version=request.args.get('compare'),
num_versions=len(versions),
allow_preview=False,
)
except InvalidVersionError:
raise WIKI_INVALID_VERSION_ERROR
# Default versions for view and compare
version_settings = {
'view': view or ('preview' if 'edit' in panels_used else 'current'),
'compare': compare or 'previous',
}
# ensure home is always lower case since it cannot be renamed
if wiki_name.lower() == 'home':
wiki_name = 'home'
if wiki_page:
version = wiki_page.version
is_current = wiki_page.is_current
content = wiki_page.html(node)
use_python_render = wiki_page.rendered_before_update
else:
version = 'NA'
is_current = False
content = ''
use_python_render = False
if can_edit:
if wiki_key not in node.wiki_private_uuids:
wiki_utils.generate_private_uuid(node, wiki_name)
sharejs_uuid = wiki_utils.get_sharejs_uuid(node, wiki_name)
else:
if wiki_key not in node.wiki_pages_current and wiki_key != 'home':
raise WIKI_PAGE_NOT_FOUND_ERROR
if 'edit' in request.args:
if wiki_settings.is_publicly_editable:
raise HTTPError(http.UNAUTHORIZED)
raise HTTPError(http.FORBIDDEN)
sharejs_uuid = None
# Opens 'edit' panel when home wiki is empty
if not content and can_edit and wiki_name == 'home':
panels_used.append('edit')
ret = {
'wiki_id': wiki_page._primary_key if wiki_page else None,
'wiki_name': wiki_page.page_name if wiki_page else wiki_name,
'wiki_content': content,
'use_python_render': use_python_render,
'page': wiki_page,
'version': version,
'versions': versions,
'sharejs_uuid': sharejs_uuid or '',
'sharejs_url': settings.SHAREJS_URL,
'is_current': is_current,
'version_settings': version_settings,
'pages_current': _get_wiki_pages_current(node),
'category': node.category,
'panels_used': panels_used,
'num_columns': num_columns,
'urls': {
'api': _get_wiki_api_urls(node, wiki_name, {
'content': node.api_url_for('wiki_page_content', wname=wiki_name),
'draft': node.api_url_for('wiki_page_draft', wname=wiki_name),
}),
'web': _get_wiki_web_urls(node, wiki_name),
'gravatar': get_gravatar(auth.user, 25),
},
}
ret.update(_view_project(node, auth, primary=True))
ret['user']['can_edit_wiki_body'] = can_edit
return ret
def project_wiki_view(auth, wname, path=None, **kwargs):
node = kwargs['node'] or kwargs['project']
anonymous = has_anonymous_link(node, auth)
wiki_name = (wname or '').strip()
wiki_key = to_mongo_key(wiki_name)
wiki_page = node.get_wiki_page(wiki_name)
toc = _serialize_wiki_toc(node, auth=auth)
can_edit = node.has_permission(auth.user, 'write') and not node.is_registration
versions = _get_wiki_versions(node, wiki_name, anonymous=anonymous)
# Determine panels used in view
panels = {'view', 'edit', 'compare', 'menu'}
if request.args and set(request.args).intersection(panels):
panels_used = [panel for panel in request.args if panel in panels]
num_columns = len(set(panels_used).intersection({'view', 'edit', 'compare'}))
if num_columns == 0:
panels_used.append('view')
num_columns = 1
else:
panels_used = ['view', 'menu']
num_columns = 1
try:
view = wiki_utils.format_wiki_version(
version=request.args.get('view'),
num_versions=len(versions),
allow_preview=True,
)
compare = wiki_utils.format_wiki_version(
version=request.args.get('compare'),
num_versions=len(versions),
allow_preview=False,
)
except InvalidVersionError:
raise WIKI_INVALID_VERSION_ERROR
# Default versions for view and compare
version_settings = {
'view': view or ('preview' if 'edit' in panels_used else 'current'),
'compare': compare or 'previous',
}
# ensure home is always lower case since it cannot be renamed
if wiki_name.lower() == 'home':
wiki_name = 'home'
if wiki_page:
version = wiki_page.version
is_current = wiki_page.is_current
content = wiki_page.html(node)
use_python_render = wiki_page.rendered_before_update
else:
version = 'NA'
is_current = False
content = ''
use_python_render = False
if can_edit:
if wiki_key not in node.wiki_private_uuids:
wiki_utils.generate_private_uuid(node, wiki_name)
sharejs_uuid = wiki_utils.get_sharejs_uuid(node, wiki_name)
else:
if wiki_key not in node.wiki_pages_current and wiki_key != 'home':
raise WIKI_PAGE_NOT_FOUND_ERROR
if 'edit' in request.args:
raise HTTPError(http.FORBIDDEN)
sharejs_uuid = None
ret = {
'wiki_id': wiki_page._primary_key if wiki_page else None,
'wiki_name': wiki_page.page_name if wiki_page else wiki_name,
'wiki_content': content,
'use_python_render': use_python_render,
'page': wiki_page,
'version': version,
'versions': versions,
'sharejs_uuid': sharejs_uuid or '',
'sharejs_url': settings.SHAREJS_URL,
'is_current': is_current,
'version_settings': version_settings,
'pages_current': _get_wiki_pages_current(node),
'toc': toc,
'category': node.category,
'panels_used': panels_used,
'num_columns': num_columns,
'urls': {
'api': _get_wiki_api_urls(node, wiki_name, {
'content': node.api_url_for('wiki_page_content', wname=wiki_name),
'draft': node.api_url_for('wiki_page_draft', wname=wiki_name),
}),
'web': _get_wiki_web_urls(node, wiki_name),
'gravatar': get_gravatar(auth.user, 25),
},
}
ret.update(_view_project(node, auth, primary=True))
return ret
