def test_reference_prefix(self): spurtsv = resource_filename(__name__, 'library-spur-se.tsv') spur = models.load_library_tables([spurtsv]) self.assertEqual(make_dag.get_reference_prefix(spur, '12304'), 'scaffold') self.assertEqual(make_dag.get_reference_prefix(spur, '12307'), 'chr')
def test_reference_prefix(self): spurtsv = resource_filename(__name__, "library-spur-se.tsv") spur = models.load_library_tables([spurtsv]) self.assertEqual(make_dag.get_reference_prefix(spur, "12304"), "scaffold") self.assertEqual(make_dag.get_reference_prefix(spur, "12307"), "chr")
def test_reference_prefix_missing(self): mm10tsv = resource_filename(__name__, 'library-mm10-se.tsv') mm10 = models.load_library_tables([mm10tsv]) self.assertEqual(make_dag.get_reference_prefix(mm10, '12304'), 'chr')
def test_reference_prefix_missing(self): mm10tsv = resource_filename(__name__, "library-mm10-se.tsv") mm10 = models.load_library_tables([mm10tsv]) self.assertEqual(make_dag.get_reference_prefix(mm10, "12304"), "chr")