def main():
#----------Setting s for option parser functionality------
parser=OptionParser(usage= usage, version=version)
parser.add_option("-q", "--quiet",
action="store_true", dest="quiet", default=False,
help="Only print warnings and errors")
parser.add_option("-t", "--template",
action="store",dest="controlfile",default=None,
help="Generate default controlfile")
parser.add_option("-l", "--logfile",
action="store",dest="logfile",default=None,
help="Writes output to logfile")
parser.add_option("-d", "--debug",
action="store_true",dest="debug",default=False,
help="Writes output to logfile")
parser.add_option("-c", "--console",
action="store_true",dest="console",default=False,
help="Activates console output")
(options, args) = parser.parse_args()
if options.controlfile!=None:
generateCf(path.abspath(options.controlfile))
print "Wrote default controlfile"
sys.exit()
if len(args)!=1:
parser.error("Incorrect number of arguments")
#------------Setting up logging capabilities -----------
rootLogger=logging.getLogger('')
reportLevel=logging.INFO
if options.quiet:
reportLevel=logging.WARNING
if options.debug:
reportLevel=logging.DEBUG
rootLogger.setLevel(reportLevel)
if options.console:
console=logging.StreamHandler()
console.setLevel(reportLevel)
formatter = logging.Formatter('%(asctime)s %(name)-12s: %(levelname)-8s %(message)s',
datefmt='%a, %d %b %Y %H:%M:%S')
console.setFormatter(formatter)
rootLogger.addHandler(console)
if options.logfile!=None:
logFileName=path.abspath(options.logfile)
if not path.exists(path.dirname(logFileName)):
print "Bad argument, directory for logfile does not exist"
sys.exit()
logfile=logging.FileHandler(logFileName,"w")
logfile.setLevel(reportLevel)
formatter = logging.Formatter('%(name)-12s: %(levelname)-8s %(message)s')
logfile.setFormatter(formatter)
rootLogger.addHandler(logfile)
logger=logging.getLogger('bumQC')
#-----------Starting main functionality----------------
logger.info("Started script bumQC")
#Creating a controlFile object from the file given as an argument
logger.info("Reading controlfile")
cf=controlFile.controlFile(fileName=path.abspath(args[0]))
logger.info("Processing controlfile")
outDir,rc,resDef,areaDict=processControlFile(cf)
logger.info("Writing summary")
fileName="bumQC_summary_"+datetime.date.today().strftime("%Y-%m-%d")+".txt"
writeEmissionSummary(path.join(outDir,fileName),rc,resDef,areaDict)
logger.info("Finished bumQC")
def main():
parser=OptionParser(usage= usage, version=version)
parser.add_option("-t", "--template",
action="store",dest="controlfile",default=None,
help="Generate default controlfile")
(options, args) = parser.parse_args()
if options.controlfile!=None:
generateCf(path.abspath(options.controlfile))
print "Wrote default controlfile"
sys.exit()
if len(args)!=1:
parser.error("Incorrect number of arguments")
cf=controlFile.controlFile(fileName=path.abspath(args[0]))
edb=cf.findString("edb:")
users=cf.findStringList("users:")
substances=cf.findStringList("substances:")
substanceIndices=cf.findStringList("substanceIndices:")
outputDir = cf.findExistingPath("outputDir:")
templateFile=cf.findExistingPath("templateFile:")
log=os.path.join(outputDir,"log_runXrepedb")
if os.path.exists(log):
fid=open(log,'w') #Emptying log-file
fid.close()
if not os.path.exists(templateFile):
report(log,"Template file does not exist")
sys.exit("Template file does not exist")
report(log,"Running python script for extraction of gridded emissions from Simair")
for i in range(len(substanceIndices)):
subst=substances[i]
substInd=substanceIndices[i]
for user in users:
report(log, "Extracting substance: "+subst+" for user: "******"emisRast_"+subst+"_"+user+".asc"
resultFilePath=os.path.join(outputDir,resultFileName)
command="xrepedb -i "+templateFile+" > "+resultFilePath
report( log,"Executing: "+command)
handle=os.popen(command,'r')
report(log, "xrepedb output:"+string.join(handle.readlines()))
status=handle.close()
if status is not None:
report(log,"Error when running runXrepedb: the process for xrepedb did not finish")
sys.exit("Error when running runXrepedb: the process for xrepedb did not finish")
else:
gzCommand="gzip -f "+resultFilePath
gzhandle=os.popen(gzCommand,'r')
gzStatus=gzhandle.close()
if gzStatus!= None:
report(log,"Could not compress: "+resultFileName)
else:
report(log,"Could not modify template file")
controlFilePath=path.abspath(sys.argv[1])
logFilePath=path.abspath(sys.argv[2])
if not path.exists(controlFilePath):
sys.exit("Controlfile does not exist")
if not path.exists(path.dirname(logFilePath)):
sys.exit("Logfile directory does not exist")
else:
log=path.join(os.getcwd(),"updateSimairDB.log")
if path.exists(log):
os.remove(log)
report(log,"\n"+20*"="+"Starting update procedure"+20*"=",reportToPrompt)
cf=controlFile.controlFile(controlFilePath)
#Collecting parameters from controlFile
new_edb=cf.findString("new_edb:")
report(log,"new_ed: "+new_edb,reportToPrompt)
old_edb=cf.findString("old_edb:")
report(log,"old_edb: "+old_edb,reportToPrompt)
wd=cf.findExistingPath("workingDir:")
report(log,"workingDir: "+wd,reportToPrompt)
od=cf.findExistingPath("outputDir:")
report(log,"outputDir: "+od,reportToPrompt)
parameters=cf.findStringList("parameters:")
strParams=""
i=0
for p in parameters:
