def alignment_to_rec(*args): default_keys = [ "config__algorithm__align_split_size", "config__algorithm__aligner", "config__algorithm__mark_duplicates", "reference__bwa__indexes", "reference__snap__indexes", "reference__bowtie2__indexes", "reference__novoalign__indexes", "rgnames__pl", "rgnames__sample", "rgnames__pu", "rgnames__lane", "rgnames__rg", "rgnames__lb" ] return cwlutils.to_rec_single(*args, default_keys=default_keys)
def alignment_to_rec(*args): default_keys = ["config__algorithm__align_split_size", "config__algorithm__aligner", "config__algorithm__mark_duplicates", "reference__bwa__indexes", "reference__snap__indexes", "reference__bowtie2__indexes", "reference__novoalign__indexes", "rgnames__pl", "rgnames__sample", "rgnames__pu", "rgnames__lane", "rgnames__rg", "rgnames__lb"] return cwlutils.to_rec_single(*args, default_keys=default_keys)