def setUp(self):
self.check = GliderCheck()
def setUp(self):
self.check = GliderCheck()
class TestGliderCheck(unittest.TestCase):
# @see
# http://www.saltycrane.com/blog/2012/07/how-prevent-nose-unittest-using-docstring-when-verbosity-2/
def shortDescription(self):
return None
# override __str__ and __repr__ behavior to show a copy-pastable nosetest name for ion tests
# ion.module:TestClassName.test_function_name
def __repr__(self):
name = self.id()
name = name.split('.')
if name[0] not in ["ion", "pyon"]:
return "%s (%s)" % (name[-1], '.'.join(name[:-1]))
else:
return "%s ( %s )" % (name[-1], '.'.join(name[:-2]) + ":" +
'.'.join(name[-2:]))
__str__ = __repr__
def get_pair(self, nc_dataset):
'''
Return a pairwise object for the dataset
'''
print nc_dataset
if isinstance(nc_dataset, basestring):
nc_dataset = Dataset(nc_dataset, 'r')
self.addCleanup(nc_dataset.close)
dogma = NetCDFDogma('nc', self.check.beliefs(), nc_dataset)
pair = DSPair(nc_dataset, dogma)
return pair
def setUp(self):
self.check = GliderCheck()
def test_location(self):
'''
Checks that a file with the proper lat and lon do work
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_locations(dataset)
self.assertTrue(result.value)
def test_location_fail(self):
'''
Ensures the checks fail for location
'''
dataset = self.get_pair(static_files['bad_location'])
result = self.check.check_locations(dataset)
self.assertEquals(result.value, (0, 1))
def test_ctd_fail(self):
'''
Ensures the ctd checks fail for temperature
'''
dataset = self.get_pair(static_files['bad_qc'])
result = self.check.check_ctd_variables(dataset)
self.assertEquals(result.value, (55, 56))
def test_ctd_vars(self):
'''
Ensures the ctd checks for the correct file
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_ctd_variables(dataset)
self.assertEquals(result.value, (56, 56))
def test_global_fail(self):
'''
Tests that the global checks fail where appropriate
'''
dataset = self.get_pair(static_files['bad_qc'])
result = self.check.check_global_attributes(dataset)
self.assertEquals(result.value, (31, 33))
def test_global(self):
'''
Tests that the global checks work
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_global_attributes(dataset)
self.assertEquals(result.value, (33, 33))
class TestGliderCheck(unittest.TestCase):
# @see
# http://www.saltycrane.com/blog/2012/07/how-prevent-nose-unittest-using-docstring-when-verbosity-2/
def shortDescription(self):
return None
# override __str__ and __repr__ behavior to show a copy-pastable nosetest name for ion tests
# ion.module:TestClassName.test_function_name
def __repr__(self):
name = self.id()
name = name.split('.')
if name[0] not in ["ion", "pyon"]:
return "%s (%s)" % (name[-1], '.'.join(name[:-1]))
else:
return "%s ( %s )" % (name[-1], '.'.join(name[:-2]) + ":" + '.'.join(name[-2:]))
__str__ = __repr__
def get_pair(self, nc_dataset):
'''
Return a pairwise object for the dataset
'''
print nc_dataset
if isinstance(nc_dataset, basestring):
nc_dataset = Dataset(nc_dataset, 'r')
self.addCleanup(nc_dataset.close)
dogma = NetCDFDogma('nc', self.check.beliefs(), nc_dataset)
pair = DSPair(nc_dataset, dogma)
return pair
def setUp(self):
self.check = GliderCheck()
def test_location(self):
'''
Checks that a file with the proper lat and lon do work
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_locations(dataset)
self.assertTrue(result.value)
def test_location_fail(self):
'''
Ensures the checks fail for location
'''
dataset = self.get_pair(static_files['bad_location'])
result = self.check.check_locations(dataset)
self.assertEquals(result.value, (0,1))
def test_ctd_fail(self):
'''
Ensures the ctd checks fail for temperature
'''
dataset = self.get_pair(static_files['bad_qc'])
result = self.check.check_ctd_variables(dataset)
self.assertEquals(result.value, (55,56))
def test_ctd_vars(self):
'''
Ensures the ctd checks for the correct file
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_ctd_variables(dataset)
self.assertEquals(result.value, (56,56))
def test_global_fail(self):
'''
Tests that the global checks fail where appropriate
'''
dataset = self.get_pair(static_files['bad_qc'])
result = self.check.check_global_attributes(dataset)
self.assertEquals(result.value, (41,64))
def test_global(self):
'''
Tests that the global checks work
'''
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_global_attributes(dataset)
self.assertEquals(result.value, (64,64))
def test_metadata(self):
'''
Tests that empty attributes fail
'''
dataset = self.get_pair(static_files['bad_metadata'])
result = self.check.check_global_attributes(dataset)
self.assertEquals(result.value, (41,64))
def test_standard_names(self):
'''
Tests that the standard names succeed/fail
'''
dataset = self.get_pair(static_files['bad_metadata'])
result = self.check.check_standard_names(dataset)
self.assertEquals(result.value, (0, 1))
dataset = self.get_pair(static_files['glider_std'])
result = self.check.check_standard_names(dataset)
self.assertEquals(result.value, (1, 1))
