Exemple #1
1
def test_string_loaded():
    DATA_STRS = ["xyz", "beagcfa", "cea", "cb",
                 "d", "c", "bdaf", "ddcd",
                 "egbfa", "a", "fba", "bcccfe",
                 "ab", "bfgbfdc", "bcbbgf", "bfbb"
                 ]
    QUERY_STRS = ["abc", "def", "ghik"]
    space_type = 'leven'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'

    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.OBJECT_AS_STRING,
                             nmslib.DistType.INT)

    for id, data in enumerate(DATA_STRS):
        nmslib.addDataPoint(index, id, data)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
        print nmslib.getDataPoint(index,i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']


    nmslib.loadIndex(index, index_name)

    print "The index %s is loaded" % index_name

    nmslib.setQueryTimeParams(index, query_time_param)

    print 'Query time parameters are set'

    print "Results for the loaded index:"

    k = 2
    for idx, data in enumerate(QUERY_STRS):
        print idx, nmslib.knnQuery(index, k, data)

    nmslib.freeIndex(index)
Exemple #2
0
def test_string_fresh(batch=True):
    DATA_STRS = ["xyz", "beagcfa", "cea", "cb",
                 "d", "c", "bdaf", "ddcd",
                 "egbfa", "a", "fba", "bcccfe",
                 "ab", "bfgbfdc", "bcbbgf", "bfbb"
                 ]
    QUERY_STRS = ["abc", "def", "ghik"]
    space_type = 'leven'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'

    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.OBJECT_AS_STRING,
                             nmslib.DistType.INT)

    if batch:
        print 'DATA_STRS', DATA_STRS
        positions = nmslib.addDataPointBatch(index, np.arange(len(DATA_STRS), dtype=np.int32), DATA_STRS)
    else:
        for id, data in enumerate(DATA_STRS):
            nmslib.addDataPoint(index, id, data)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
        print nmslib.getDataPoint(index,i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)
    nmslib.setQueryTimeParams(index, query_time_param)

    print 'Query time parameters are set'

    print "Results for the freshly created index:"

    k = 2
    if batch:
        num_threads = 10
        res = nmslib.knnQueryBatch(index, num_threads, k, QUERY_STRS)
    for idx, data in enumerate(QUERY_STRS):
        res = nmslib.knnQuery(index, k, data)
        print idx, data, res, [DATA_STRS[i] for i in res]

    nmslib.saveIndex(index, index_name)

    print "The index %s is saved" % index_name

    nmslib.freeIndex(index)
Exemple #3
0
def test_string_fresh(batch=True):
    DATA_STRS = [
        "xyz", "beagcfa", "cea", "cb", "d", "c", "bdaf", "ddcd", "egbfa", "a",
        "fba", "bcccfe", "ab", "bfgbfdc", "bcbbgf", "bfbb"
    ]
    QUERY_STRS = ["abc", "def", "ghik"]
    space_type = 'leven'
    space_param = []
    method_name = 'small_world_rand'
    index_name = method_name + '.index'

    index = nmslib.init(space_type, space_param, method_name,
                        nmslib.DataType.OBJECT_AS_STRING, nmslib.DistType.INT)

    if batch:
        print 'DATA_STRS', DATA_STRS
        positions = nmslib.addDataPointBatch(
            index, np.arange(len(DATA_STRS), dtype=np.int32), DATA_STRS)
    else:
        for id, data in enumerate(DATA_STRS):
            nmslib.addDataPoint(index, id, data)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0, min(MAX_PRINT_QTY, nmslib.getDataPointQty(index))):
        print nmslib.getDataPoint(index, i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)
    nmslib.setQueryTimeParams(index, query_time_param)

    print 'Query time parameters are set'

    print "Results for the freshly created index:"

    k = 2
    if batch:
        num_threads = 10
        res = nmslib.knnQueryBatch(index, num_threads, k, QUERY_STRS)
    for idx, data in enumerate(QUERY_STRS):
        res = nmslib.knnQuery(index, k, data)
        print idx, data, res, [DATA_STRS[i] for i in res]

    nmslib.saveIndex(index, index_name)

    print "The index %s is saved" % index_name

    nmslib.freeIndex(index)
Exemple #4
0
def test_object_as_string_fresh(batch=True):
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.OBJECT_AS_STRING,
                             nmslib.DistType.FLOAT)

    if batch:
        data = [s for s in read_data_as_string('sample_dataset.txt')]
        positions = nmslib.addDataPointBatch(index, np.arange(len(data), dtype=np.int32), data)
    else:
        for id, data in enumerate(read_data_as_string('sample_dataset.txt')):
            nmslib.addDataPoint(index, id, data)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print nmslib.getDataPoint(index, i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)

    print 'The index is created'

    nmslib.setQueryTimeParams(index,query_time_param)

    print 'Query time parameters are set'

    print "Results for the freshly created index:"

    k = 3

    for idx, data in enumerate(read_data_as_string('sample_queryset.txt')):
        print idx, nmslib.knnQuery(index, k, data)

    nmslib.saveIndex(index, index_name)

    print "The index %s is saved" % index_name

    nmslib.freeIndex(index)
Exemple #5
0
def test_object_as_string_fresh(batch=True):
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.OBJECT_AS_STRING,
                             nmslib.DistType.FLOAT)

    if batch:
        data = [s for s in read_data_as_string('sample_dataset.txt')]
        positions = nmslib.addDataPointBatch(index, np.arange(len(data), dtype=np.int32), data)
    else:
        for id, data in enumerate(read_data_as_string('sample_dataset.txt')):
            nmslib.addDataPoint(index, id, data)

    print('Let\'s print a few data entries')
    print('We have added %d data points' % nmslib.getDataPointQty(index))

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print(nmslib.getDataPoint(index, i))

    print('Let\'s invoke the index-build process')

    index_param = ['NN=17', 'efConstruction=50', 'indexThreadQty=4']
    query_time_param = ['efSearch=50']

    nmslib.createIndex(index, index_param)

    print('The index is created')

    nmslib.setQueryTimeParams(index,query_time_param)

    print('Query time parameters are set')

    print("Results for the freshly created index:")

    k = 3

    for idx, data in enumerate(read_data_as_string('sample_queryset.txt')):
        print(idx, nmslib.knnQuery(index, k, data))

    nmslib.saveIndex(index, index_name)

    print("The index %s is saved" % index_name)

    nmslib.freeIndex(index)
Exemple #6
0
def test_string_loaded():
    DATA_STRS = ["xyz", "beagcfa", "cea", "cb",
                 "d", "c", "bdaf", "ddcd",
                 "egbfa", "a", "fba", "bcccfe",
                 "ab", "bfgbfdc", "bcbbgf", "bfbb"
                 ]
    QUERY_STRS = ["abc", "def", "ghik"]
    space_type = 'leven'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'

    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.OBJECT_AS_STRING,
                             nmslib.DistType.INT)

    for id, data in enumerate(DATA_STRS):
        nmslib.addDataPoint(index, id, data)

    print('Let\'s print a few data entries')
    print('We have added %d data points' % nmslib.getDataPointQty(index))

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
        print(nmslib.getDataPoint(index,i))

    print('Let\'s invoke the index-build process')

    index_param = ['NN=17', 'efConstruction=50', 'indexThreadQty=4']
    query_time_param = ['efSearch=50']


    nmslib.loadIndex(index, index_name)

    print("The index %s is loaded" % index_name)

    nmslib.setQueryTimeParams(index, query_time_param)

    print('Query time parameters are set')

    print("Results for the loaded index:")

    k = 2
    for idx, data in enumerate(QUERY_STRS):
        print(idx, nmslib.knnQuery(index, k, data))

    nmslib.freeIndex(index)
Exemple #7
0
def test_sparse_vector_fresh():
    space_type = 'cosinesimil_sparse'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '_sparse.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.SPARSE_VECTOR,
                             nmslib.DistType.FLOAT)

    for id, data in enumerate(read_sparse_data('sample_sparse_dataset.txt')):
        nmslib.addDataPoint(index, id, data)

    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print nmslib.getDataPoint(index,i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)

    print 'The index is created'

    nmslib.setQueryTimeParams(index,query_time_param)

    print 'Query time parameters are set'

    print "Results for the freshly created index:"

    k = 3

    for idx, data in enumerate(read_sparse_data('sample_sparse_queryset.txt')):
        print idx, nmslib.knnQuery(index, k, data)

    nmslib.saveIndex(index, index_name)

    print "The index %s is saved" % index_name

    nmslib.freeIndex(index)
Exemple #8
0
def test_sparse_vector_fresh():
    space_type = 'cosinesimil_sparse_fast'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '_sparse.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.SPARSE_VECTOR,
                             nmslib.DistType.FLOAT)

    for id, data in enumerate(read_sparse_data('sample_sparse_dataset.txt')):
        nmslib.addDataPoint(index, id, data)

    print('We have added %d data points' % nmslib.getDataPointQty(index))

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print(nmslib.getDataPoint(index,i))

    print('Let\'s invoke the index-build process')

    index_param = ['NN=17', 'efConstruction=50', 'indexThreadQty=4']
    query_time_param = ['efSearch=50']

    nmslib.createIndex(index, index_param)

    print('The index is created')

    nmslib.setQueryTimeParams(index,query_time_param)

    print('Query time parameters are set')

    print("Results for the freshly created index:")

    k = 3

    for idx, data in enumerate(read_sparse_data('sample_sparse_queryset.txt')):
        print(idx, nmslib.knnQuery(index, k, data))

    nmslib.saveIndex(index, index_name)

    print("The index %s is saved" % index_name)

    nmslib.freeIndex(index)
Exemple #9
0
def test_vector_loaded():
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.DENSE_VECTOR,
                             nmslib.DistType.FLOAT)

    for id, data in enumerate(read_data('sample_dataset.txt')):
        pos = nmslib.addDataPoint(index, id, data)
	if id != pos:
            print 'id %s != pos %s' % (id, pos)
	    sys.exit(1)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print nmslib.getDataPoint(index,i)

    print 'Let\'s invoke the index-build process'


    query_time_param = ['initSearchAttempts=3']

    nmslib.loadIndex(index, index_name)

    print "The index %s is loaded" % index_name

    nmslib.setQueryTimeParams(index,query_time_param)

    print 'Query time parameters are set'

    print "Results for the loaded index"

    k = 2
    for idx, data in enumerate(read_data('sample_queryset.txt')):
        print idx, nmslib.knnQuery(index, k, data)

    nmslib.freeIndex(index)
Exemple #10
0
def test_vector_loaded():
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.DENSE_VECTOR,
                             nmslib.DistType.FLOAT)

    for id, data in enumerate(read_data('sample_dataset.txt')):
        pos = nmslib.addDataPoint(index, id, data)
        if id != pos:
            print('id %s != pos %s' % (id, pos))
            sys.exit(1)

    print('Let\'s print a few data entries')
    print('We have added %d data points' % nmslib.getDataPointQty(index))

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print(nmslib.getDataPoint(index,i))

    print('Let\'s invoke the index-build process')


    query_time_param = ['efSearch=50']

    nmslib.loadIndex(index, index_name)

    print("The index %s is loaded" % index_name)

    nmslib.setQueryTimeParams(index,query_time_param)

    print('Query time parameters are set')

    print("Results for the loaded index")

    k = 2
    for idx, data in enumerate(read_data('sample_queryset.txt')):
        print(idx, nmslib.knnQuery(index, k, data))

    nmslib.freeIndex(index)
Exemple #11
0
def test_vector_fresh(fast=True):
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name  = method_name + '.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(
                             space_type,
                             space_param,
                             method_name,
                             nmslib.DataType.DENSE_VECTOR,
                             nmslib.DistType.FLOAT)

    start = time.time()
    if fast:
        data = read_data_fast('sample_dataset.txt')
        print 'data.shape', data.shape
        positions = nmslib.addDataPointBatch(index, np.arange(len(data), dtype=np.int32), data)
    else:
        for id, data in enumerate(read_data('sample_dataset.txt')):
            pos = nmslib.addDataPoint(index, id, data)
	    if id != pos:
                print 'id %s != pos %s' % (id, pos)
		sys.exit(1)
    end = time.time()
    print 'added data in %s secs' % (end - start)

    print 'Let\'s print a few data entries'
    print 'We have added %d data points' % nmslib.getDataPointQty(index)

    for i in range(0,min(MAX_PRINT_QTY,nmslib.getDataPointQty(index))):
       print nmslib.getDataPoint(index, i)

    print 'Let\'s invoke the index-build process'

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)

    print 'The index is created'

    nmslib.setQueryTimeParams(index,query_time_param)

    print 'Query time parameters are set'

    print "Results for the freshly created index:"

    k = 3

    start = time.time()
    if fast:
        num_threads = 10
        query = read_data_fast('sample_queryset.txt')
        res = nmslib.knnQueryBatch(index, num_threads, k, query)
        for idx, v in enumerate(res):
            print idx, v
    else:
        for idx, data in enumerate(read_data('sample_queryset.txt')):
            print idx, nmslib.knnQuery(index, k, data)
    end = time.time()
    print 'querying done in %s secs' % (end - start)

    nmslib.saveIndex(index, index_name)

    print "The index %s is saved" % index_name

    nmslib.freeIndex(index)
Exemple #12
0
def test_vector_fresh(fast=True):
    space_type = 'cosinesimil'
    space_param = []
    method_name = 'small_world_rand'
    index_name = method_name + '.index'
    if os.path.isfile(index_name):
        os.remove(index_name)
    index = nmslib.init(space_type, space_param, method_name,
                        nmslib.DataType.DENSE_VECTOR, nmslib.DistType.FLOAT)

    start = time.time()
    if fast:
        data = read_data_fast('sample_dataset.txt')
        print('data.shape', data.shape)
        positions = nmslib.addDataPointBatch(
            index, np.arange(len(data), dtype=np.int32), data)
    else:
        for id, data in enumerate(read_data('sample_dataset.txt')):
            pos = nmslib.addDataPoint(index, id, data)
            if id != pos:
                print('id %s != pos %s' % (id, pos))
                sys.exit(1)
    end = time.time()
    print('added data in %s secs' % (end - start))

    print('Let\'s print a few data entries')
    print('We have added %d data points' % nmslib.getDataPointQty(index))

    print("Distance between points (0,0) " +
          str(nmslib.getDistance(index, 0, 0)))
    print("Distance between points (1,1) " +
          str(nmslib.getDistance(index, 1, 1)))
    print("Distance between points (0,1) " +
          str(nmslib.getDistance(index, 0, 1)))
    print("Distance between points (1,0) " +
          str(nmslib.getDistance(index, 1, 0)))

    for i in range(0, min(MAX_PRINT_QTY, nmslib.getDataPointQty(index))):
        print(nmslib.getDataPoint(index, i))

    print('Let\'s invoke the index-build process')

    index_param = ['NN=17', 'initIndexAttempts=3', 'indexThreadQty=4']
    query_time_param = ['initSearchAttempts=3']

    nmslib.createIndex(index, index_param)

    print('The index is created')

    nmslib.setQueryTimeParams(index, query_time_param)

    print('Query time parameters are set')

    print("Results for the freshly created index:")

    k = 3

    start = time.time()
    if fast:
        num_threads = 10
        query = read_data_fast('sample_queryset.txt')
        res = nmslib.knnQueryBatch(index, num_threads, k, query)
        for idx, v in enumerate(res):
            print(idx, v)
    else:
        for idx, data in enumerate(read_data('sample_queryset.txt')):
            print(idx, nmslib.knnQuery(index, k, data))
    end = time.time()
    print('querying done in %s secs' % (end - start))

    nmslib.saveIndex(index, index_name)

    print("The index %s is saved" % index_name)

    nmslib.freeIndex(index)