Python get_file_parts Exemples

Exemple #1

Fichier : starfile_edit_argparse_tests.py Projet : AGMMGA/EM_scripts

 def header_line(self):
     line = '_rlnMicrographName #1\m'
     self.assertEqual((0,0,0), s.get_file_parts(line))

Exemple #2

Fichier : starfile_edit_argparse_tests.py Projet : AGMMGA/EM_scripts

 def test_ctf_starfile_line(self):
     line = '300 ... 0.2 Micrographs/20160126_BRCA1_GO_0001.ctf:mrc 1 2 Micrographs/20160126_BRCA1_GO_0001.mrc'
     self.assertEqual(s.get_file_parts(line), ('20160126_BRCA1_GO_0001',
                                               '20160126_BRCA1_GO_', '0001'))

Exemple #3

Fichier : starfile_edit_argparse_tests.py Projet : AGMMGA/EM_scripts

 def test_normal_starfile_line(self):
     line =  'Micrographs/20160126_BRCA1_GO_0001.mrc Micrographs/20160126_BRCA1_GO_0001.ctf ... 6911'
     self.assertEqual(s.get_file_parts(line), ('20160126_BRCA1_GO_0001',
                                               '20160126_BRCA1_GO_', '0001'))

Exemple #4

 def header_line(self):
     line = '_rlnMicrographName #1\m'
     self.assertEqual((0, 0, 0), s.get_file_parts(line))

Exemple #5

 def test_ctf_starfile_line(self):
     line = '300 ... 0.2 Micrographs/20160126_BRCA1_GO_0001.ctf:mrc 1 2 Micrographs/20160126_BRCA1_GO_0001.mrc'
     self.assertEqual(
         s.get_file_parts(line),
         ('20160126_BRCA1_GO_0001', '20160126_BRCA1_GO_', '0001'))

Exemple #6

 def test_normal_starfile_line(self):
     line = 'Micrographs/20160126_BRCA1_GO_0001.mrc Micrographs/20160126_BRCA1_GO_0001.ctf ... 6911'
     self.assertEqual(
         s.get_file_parts(line),
         ('20160126_BRCA1_GO_0001', '20160126_BRCA1_GO_', '0001'))