def test_icos(depth=3, cell=30, **kwargs):
# dodec
# (+-1, +-1, +-1)
# (0, +-1/p, +-p)
# (+-1/p, +-p, 0)
# (+-p, 0, +-1/p)
# icos
# (0, +-1, +-p)
# (+-1, +-p, 0)
# (+-p, 0, +-1)
p = (1.0 + sqrt(5.0)) / 2.0
q = 1.0 / p
v33a = (Vec(1, 1, 1).normalized() - Vec(q, p, 0).normalized()).normalized()
v33b = (Vec(1, 1, 1).normalized() - Vec(p, 0, q).normalized()).normalized()
v33c = (Vec(1, 1, 1).normalized() - Vec(0, q, p).normalized()).normalized()
icsang = angle_degrees(Vec(1, 1, 1), V0, v33a)
tetang = 180.0 - math.acos(-1.0 / 3.0) * 180.0 / math.pi
print icsang, tetang
delta_deg = icsang - tetang
v33a = RAD(v33a.cross(Vec(1, 1, 1)), delta_deg) * v33a
v33b = RAD(v33b.cross(Vec(1, 1, 1)), delta_deg) * v33b
v33c = RAD(v33c.cross(Vec(1, 1, 1)), delta_deg) * v33c
print angle_degrees(Vec(1, 1, 1), V0, v33a)
print angle_degrees(Vec(1, 1, 1), V0, v33b)
print angle_degrees(Vec(1, 1, 1), V0, v33c)
G = [
# icos 3folds
SymElem("C3", Vec(+1, +1, +1)),
SymElem("C3", Vec(+1, +1, -1)),
SymElem("C3", Vec(+1, -1, +1)),
SymElem("C3", Vec(-1, +1, +1)),
SymElem("C3", Vec(0, +q, +p)),
SymElem("C3", Vec(0, +q, -p)),
SymElem("C3", Vec(+q, +p, 0)),
SymElem("C3", Vec(+q, -p, 0)),
SymElem("C3", Vec(+p, 0, +q)),
SymElem("C3", Vec(-p, 0, +q)),
SymElem("C5", Vec(0, +p, 1)),
SymElem("C5", Vec(0, -p, 1)),
SymElem("C5", Vec(+p, 1, 0)),
SymElem("C5", Vec(-p, 1, 0)),
SymElem("C5", Vec(1, 0, +p)),
SymElem("C5", Vec(1, 0, -p)),
# tet
SymElem("C3", Vec(1, 1, 1), cen=cell * Vec(1, 1, 1)),
SymElem("C3", v33a, cen=cell * Vec(1, 1, 1)),
SymElem("C3", v33b, cen=cell * Vec(1, 1, 1)),
SymElem("C3", v33c, cen=cell * Vec(1, 1, 1)),
SymElem("C2", v33a + v33b, cen=cell * Vec(1, 1, 1)),
SymElem("C2", v33b + v33c, cen=cell * Vec(1, 1, 1)),
SymElem("C2", v33c + v33a, cen=cell * Vec(1, 1, 1)),
]
symtrie = generate_sym_trie(G, depth=depth)
# symtrie.visit(print_node)
nodes = []
buildcgo = BuildCGO(nodes=nodes, origin=cell *
Vec(0.5, 0.5, 0.5), showelems=True, **kwargs)
symtrie.visit(buildcgo)
buildcgo.show()
def test_P4132(depth=8, cell=50, maxrad=80):
#**** P4132 ****
# C2 and C3 at angle = 35.2644 offset = 0.176777
# C2 axis=[-0.707107,0.707107,0] origin=[-0.125,-0.125,-0.125]
# C3 axis=[0.57735,-0.57735,0.57735] origin=[0,-0.5,-0.5]
AXS = [Vec(-1, 1, 0),
Vec(1, -1, 1)]
CEN = [cell * Vec(1, 1, 1) / -8.0,
cell * Vec(0, 1, 1) / -2.0]
# AXS = [ Vec(-1, 1, 0) ,
# Vec( 1, 1, 1) ]
# CEN = [ cell * Vec(1,1,1)/-8.0,
# cell * Vec(0,0,0) ]
G = [
SymElem("C2", axis=AXS[0], cen=CEN[0]),
SymElem("C3", axis=AXS[1], cen=CEN[1]),
]
symtrie = generate_sym_trie(G, depth=depth)
# buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] )
cencell = cell / 2.0 * Vec(1, 1, 1)
buildcgo = BuildCGO(nodes=[CEN[1] + randnorm() * 5.0, CEN[0] + randnorm() * 8.0],
origin=cencell, maxrad=maxrad, showlinks=False, showelems=True)
symtrie.visit(buildcgo)
buildcgo.show()
cube(Vec(0, 0, 0), cell * Vec(1, 1, 1))
for g in G:
print "show", g
g.show(radius=2.0, sphereradius=4.0)
return AXS, CEN
def test_F432(depth=6, cell=100, maxrad=90):
# C3 and D2 at angle = 35.2644 offset = 0
# C3 axis=[0.57735,0.57735,0.57735] origin=[0,0,0]
# D2 axis=[1,0,0] axis2=[0,-0.707107,0.707107] origin=[0,0.25,0.25]
AXS = [Vec(1, 1, 1),
Vec(1, 0, 0)]
CEN = [cell * Vec(0, 0, 0),
cell * Vec(0, 0.25, 0.25)]
G = [
SymElem("C2", axis=Vec(1, 1, 0), cen=Vec(0, 0, 0)),
SymElem("C3", axis=AXS[0], cen=CEN[0]),
SymElem("C4", axis=Vec(1, 0, 0), cen=Vec(0, 0, 0)),
SymElem("D2", axis=AXS[1], axis2=Vec(0, -1, 1), cen=CEN[1])
]
symtrie = generate_sym_trie(G, depth=depth)
# buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] )
nodes = [
CEN[0] + projperp(AXS[0], randnorm()) * 8.0,
CEN[1] + projperp(AXS[1], randnorm()) * 8.0
]
buildcgo = BuildCGO(nodes=nodes, maxrad=maxrad,
origin=cell * Vec(0.5, 0.5, 0.5), showlinks=False)
symtrie.visit(buildcgo)
buildcgo.show()
cube(Vec(0, 0, 0), cell * Vec(1, 1, 1))
for g in G:
print "show", g
g.show(radius=2.0, sphereradius=4.0)
return AXS, CEN
def test_I213(depth=16, cell=100, maxrad=9e9):
# C3 and C2 at angle = 54.7356 offset = 0.176777
# C3 axis=[-0.57735,0.57735,0.57735] origin=[-0.166667,0.166667,-0.333333]
# C2 axis=[1,0,0] origin=[0,0.5,0.25]
# AXS = [ Vec(-1,1,1),
# Vec( 1,0,0) ]
# CEN = [ cell * Vec(-1,1,-2)/6.0 ,
# cell * Vec(0,0.5,0.25) ]
AXS = [Vec(1, 1, 1),
Vec(1, 0, 0)]
CEN = [cell * Vec(0, 0, 0),
cell * Vec(0, 0, 0.25)]
G = [
SymElem("C3", axis=AXS[0], cen=CEN[0]),
SymElem("C2", axis=AXS[1], cen=CEN[1])
]
symtrie = generate_sym_trie(G, depth=depth)
# buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] )
nodes = [
CEN[0] + projperp(AXS[0], randnorm()) * 8.0,
CEN[1] + projperp(AXS[1], randnorm()) * 8.0
]
buildcgo = BuildCGO(nodes=nodes, maxrad=maxrad,
origin=cell * Vec(0.5, 0.5, 0.5), showlinks=True)
symtrie.visit(buildcgo)
buildcgo.show()
cube(Vec(0, 0, 0), cell * Vec(1, 1, 1))
for g in G:
print "show", g
g.show(radius=2.0, sphereradius=4.0)
return AXS, CEN
def test_F432(depth=6,cell=100,maxrad=90): #C3 and D2 at angle = 35.2644 offset = 0 # C3 axis=[0.57735,0.57735,0.57735] origin=[0,0,0] # D2 axis=[1,0,0] axis2=[0,-0.707107,0.707107] origin=[0,0.25,0.25] AXS = [ Vec(1,1,1), Vec(1,0,0) ] CEN = [ cell * Vec(0,0,0) , cell * Vec(0,0.25,0.25) ] G = [ SymElem( "C2", axis=Vec(1,1,0), cen=Vec(0,0,0) ), SymElem( "C3", axis=AXS[0], cen=CEN[0] ), SymElem( "C4", axis=Vec(1,0,0), cen=Vec(0,0,0) ), SymElem( "D2", axis=AXS[1], axis2=Vec(0,-1,1), cen=CEN[1] ) ] symtrie = generate_sym_trie(G,depth=depth) # buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] ) nodes = [ CEN[0]+projperp(AXS[0],randnorm())*8.0, CEN[1]+projperp(AXS[1],randnorm())*8.0 ] buildcgo = BuildCGO( nodes=nodes, maxrad=maxrad, origin=cell*Vec(0.5,0.5,0.5), showlinks=False ) symtrie.visit(buildcgo) buildcgo.show() cube( Vec(0,0,0), cell*Vec(1,1,1) ) for g in G: print "show",g g.show(radius=2.0,sphereradius=4.0) return AXS,CEN
def test_P4132(depth=8,cell=50,maxrad=80): #**** P4132 **** #C2 and C3 at angle = 35.2644 offset = 0.176777 # C2 axis=[-0.707107,0.707107,0] origin=[-0.125,-0.125,-0.125] # C3 axis=[0.57735,-0.57735,0.57735] origin=[0,-0.5,-0.5] AXS = [ Vec(-1, 1, 0) , Vec( 1,-1, 1) ] CEN = [ cell * Vec(1,1,1)/-8.0, cell * Vec(0,1,1)/-2.0 ] # AXS = [ Vec(-1, 1, 0) , # Vec( 1, 1, 1) ] # CEN = [ cell * Vec(1,1,1)/-8.0, # cell * Vec(0,0,0) ] G = [ SymElem( "C2", axis=AXS[0], cen=CEN[0] ), SymElem( "C3", axis=AXS[1], cen=CEN[1] ), ] symtrie = generate_sym_trie(G,depth=depth) # buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] ) cencell = cell/2.0 * Vec(1,1,1) buildcgo = BuildCGO( nodes=[ CEN[1]+randnorm()*5.0, CEN[0]+randnorm()*8.0 ], origin=cencell, maxrad=maxrad, showlinks=False, showelems=True ) symtrie.visit(buildcgo) buildcgo.show() cube( Vec(0,0,0), cell*Vec(1,1,1) ) for g in G: print "show",g g.show(radius=2.0,sphereradius=4.0) return AXS,CEN
def test_I213(depth=16,cell=100,maxrad=9e9): #C3 and C2 at angle = 54.7356 offset = 0.176777 # C3 axis=[-0.57735,0.57735,0.57735] origin=[-0.166667,0.166667,-0.333333] # C2 axis=[1,0,0] origin=[0,0.5,0.25] # AXS = [ Vec(-1,1,1), # Vec( 1,0,0) ] # CEN = [ cell * Vec(-1,1,-2)/6.0 , # cell * Vec(0,0.5,0.25) ] AXS = [ Vec(1,1,1), Vec(1,0,0) ] CEN = [ cell * Vec(0,0,0) , cell * Vec(0,0,0.25) ] G = [ SymElem( "C3", axis=AXS[0], cen=CEN[0] ), SymElem( "C2", axis=AXS[1], cen=CEN[1] ) ] symtrie = generate_sym_trie(G,depth=depth) # buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] ) nodes = [ CEN[0]+projperp(AXS[0],randnorm())*8.0, CEN[1]+projperp(AXS[1],randnorm())*8.0 ] buildcgo = BuildCGO( nodes=nodes, maxrad=maxrad, origin=cell*Vec(0.5,0.5,0.5), showlinks=True ) symtrie.visit(buildcgo) buildcgo.show() cube( Vec(0,0,0), cell*Vec(1,1,1) ) for g in G: print "show",g g.show(radius=2.0,sphereradius=4.0) return AXS,CEN
def test_icos( depth=3, cell=30, **kwargs ):
# dodec
# (+-1, +-1, +-1)
# (0, +-1/p, +-p)
# (+-1/p, +-p, 0)
# (+-p, 0, +-1/p)
# icos
# (0, +-1, +-p)
# (+-1, +-p, 0)
# (+-p, 0, +-1)
p = (1.0+sqrt(5.0))/2.0
q = 1.0/p
v33a = ( Vec(1,1,1).normalized() - Vec(q,p,0).normalized() ).normalized()
v33b = ( Vec(1,1,1).normalized() - Vec(p,0,q).normalized() ).normalized()
v33c = ( Vec(1,1,1).normalized() - Vec(0,q,p).normalized() ).normalized()
icsang = angle_degrees( Vec(1,1,1),V0, v33a )
tetang = 180.0-math.acos(-1.0/3.0)*180.0/math.pi
print icsang, tetang
delta_deg = icsang-tetang
v33a = RAD(v33a.cross(Vec(1,1,1)),delta_deg) * v33a
v33b = RAD(v33b.cross(Vec(1,1,1)),delta_deg) * v33b
v33c = RAD(v33c.cross(Vec(1,1,1)),delta_deg) * v33c
print angle_degrees(Vec(1,1,1),V0,v33a)
print angle_degrees(Vec(1,1,1),V0,v33b)
print angle_degrees(Vec(1,1,1),V0,v33c)
G = [
# icos 3folds
SymElem("C3",Vec(+1,+1,+1)),
SymElem("C3",Vec(+1,+1,-1)),
SymElem("C3",Vec(+1,-1,+1)),
SymElem("C3",Vec(-1,+1,+1)),
SymElem("C3",Vec( 0,+q,+p)),
SymElem("C3",Vec( 0,+q,-p)),
SymElem("C3",Vec(+q,+p, 0)),
SymElem("C3",Vec(+q,-p, 0)),
SymElem("C3",Vec(+p, 0,+q)),
SymElem("C3",Vec(-p, 0,+q)),
SymElem("C5",Vec( 0,+p, 1)),
SymElem("C5",Vec( 0,-p, 1)),
SymElem("C5",Vec(+p, 1, 0)),
SymElem("C5",Vec(-p, 1, 0)),
SymElem("C5",Vec( 1, 0, +p)),
SymElem("C5",Vec( 1, 0, -p)),
# tet
SymElem("C3",Vec(1,1,1),cen=cell*Vec(1,1,1)),
SymElem("C3",v33a,cen=cell*Vec(1,1,1)),
SymElem("C3",v33b,cen=cell*Vec(1,1,1)),
SymElem("C3",v33c,cen=cell*Vec(1,1,1)),
SymElem("C2",v33a+v33b,cen=cell*Vec(1,1,1)),
SymElem("C2",v33b+v33c,cen=cell*Vec(1,1,1)),
SymElem("C2",v33c+v33a,cen=cell*Vec(1,1,1)),
]
symtrie = generate_sym_trie(G,depth=depth)
# symtrie.visit(print_node)
nodes = [ ]
buildcgo = BuildCGO( nodes=nodes, origin=cell*Vec(0.5,0.5,0.5), showelems=True, **kwargs )
symtrie.visit(buildcgo)
buildcgo.show()
def test_quasi( depth=8, cell=20.0, maxrad=9e9 ): G = [ SymElem( "C2", axis=Vec(1,0,0) ), SymElem( "C2", axis=Vec(0,1,0) ), SymElem( "C2", axis=Vec(0,0,1) ), SymElem( "C3", axis=Vec(+1,+1,+1) ), SymElem( "C3", axis=Vec(+1,-1,-1) ), SymElem( "C3", axis=Vec(-1,+1,-1) ), SymElem( "C3", axis=Vec(-1,-1,+1) ), SymElem( "C2", axis=Vec(2,-1,-1), cen=cell*Vec(1,1,1) ), ] nodes = [ ] symtrie = generate_sym_trie(G,depth=depth) symtrie.visit(print_node) print symtrie buildcgo = BuildCGO( nodes=nodes, maxrad=maxrad, origin=cell*Vec(0.5,0.5,0.5), showlinks=False, showelems=True ) symtrie.visit(buildcgo) buildcgo.show()
def test_I432( depth=6, cell=50, **kwargs ): #**** I432 **** #C2 and D3 at angle = 35.2644 offset = 0.353553 # C2 axis=[-0.707107,0.707107,0] origin=[0.25,0.25,0.25] # D3 axis=[-0.57735,0.57735,0.57735] axis2=[0.707107,0.707107,0] origin=[0,0,0] G = [ SymElem( "C2", axis=Vec(-1,1,0), cen=Vec(1,1,1)/4.0*cell ), SymElem( "D3", axis=Vec(-1,1,1), axis2=Vec(1,1,0) ) ] symtrie = generate_sym_trie(G,depth=depth) # buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] ) nodes = [] buildcgo = BuildCGO( nodes=nodes, origin=cell*Vec(0.5,0.5,0.5), showlinks=False, **kwargs ) symtrie.visit(buildcgo) buildcgo.show() cube( Vec(0,0,0), cell*Vec(1,1,1) ) for g in G: print "show",g g.show(radius=2.0,sphereradius=4.0)
def test_xtal(G, cell, depth=4, mindepth=0, symdef=1, shownodes=1, **kwargs):
v = cmd.get_view()
CEN = [g.cen for g in G]
FN = list()
tag = "test" if not "tag" in kwargs else kwargs['tag']
for d in range(mindepth, depth + 1):
symtrie = generate_sym_trie(G, depth=d)
# buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] )
nodes = []
if "component_pos" in kwargs.keys():
raise NotImplementedError("component_pos is no longer used")
# nodes = kwargs["component_pos"][:1]
buildcgo = BuildCGO(nodes=nodes, label=tag + "_DEPTH%i" % d, **kwargs)
symtrie.visit(buildcgo)
buildcgo.show()
if shownodes:
find_nodes = ComponentCenterVisitor(
symelems=G, label=tag + "_NODES%i" % d, **kwargs)
symtrie.visit(find_nodes)
FN.append(find_nodes)
if symdef:
sdef_string = FN[-1].make_symdef(**kwargs)
print "==================== SYMDEF (dump to " + tag + "_" + str(d) + ".sym) ===================="
print sdef_string
print "====================================================================="
with open(tag + "_" + str(d) + ".sym", "w") as out:
out.write(sdef_string)
if 'symdef_check' in kwargs and kwargs['symdef_check']:
sdef = RosettaSymDef()
sdef.parse(sdef_string)
sdef.show("SYMDEF_" + tag)
for fn in FN:
fn.show(**kwargs) # dumb order hack for pymol up/dn
cmd.disable("all")
cmd.enable(tag + "_DEPTH%i" % (depth))
cmd.enable(tag + "_NODES%i" % (depth))
count = CountFrames()
symtrie.visit(count)
print "N Frames:", count.count
cmd.set_view(v)
def test_D4OCT(depth=4):
CELL = 30
G = [
# SymElem("C2",axis=Vec( 1,0,0),cen=Vec( 0 ,CELL/2.0, CELL/4.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(-CELL/6.0,CELL/6.0,-CELL/3.0)),
# SymElem("C2",axis=Vec(1,1,0),cen=CELL*Vec(0,0.0,0.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(0,0,0)),
SymElem("C2", axis=Vec(1, 1, 0), cen=Vec(0, 0, CELL)),
SymElem("C3", axis=Vec(1, 1, 1), cen=Vec(0, 0, CELL)),
SymElem("C4", axis=Vec(1, 0, 0), cen=Vec(0, 0, CELL)),
SymElem("C4", axis=Vec(0, 0, 1)),
SymElem("C2", axis=Vec(1, 0, 0)),
SymElem("C2", axis=Vec(0, 1, 0)),
]
# for elem in G: print elem
symtrie = generate_sym_trie(G, depth=depth)
# buildcgo = BuildCGO( nodes=[ Vec(2,4,3), Vec(-6,-2,35), ] )
buildcgo = BuildCGO(nodes=[Vec(-6, -2, CELL + 5), Vec(2, 4, 3), ])
# buildcgo = BuildCGO( nodes=[ Vec(-6,-2,35), ] )
# buildcgo = BuildCGO( nodes=[ Vec(2,4,3), ] )
symtrie.visit(buildcgo)
buildcgo.show()
def test_xtal(G,cell,depth=4,mindepth=0,symdef=1,shownodes=1,**kwargs):
v = cmd.get_view()
CEN = [g.cen for g in G]
FN = list()
tag = "test" if not "tag" in kwargs else kwargs['tag']
for d in range(mindepth,depth+1):
symtrie = generate_sym_trie(G,depth=d)
# buildcgo = BuildCGO( nodes=[ CEN1+Vec(2,3,4), CEN2+Vec(2,4,3), ] )
nodes = []
if "component_pos" in kwargs.keys():
raise NotImplementedError("component_pos is no longer used")
# nodes = kwargs["component_pos"][:1]
buildcgo = BuildCGO( nodes=nodes, label=tag+"_DEPTH%i"%d,**kwargs )
symtrie.visit(buildcgo)
buildcgo.show()
if shownodes:
find_nodes = ComponentCenterVisitor(symelems=G,label=tag+"_NODES%i"%d,**kwargs)
symtrie.visit(find_nodes)
FN.append(find_nodes)
if symdef:
sdef_string = FN[-1].make_symdef(**kwargs)
print "==================== SYMDEF (dump to "+tag+"_"+str(d)+".sym) ===================="
print sdef_string
print "====================================================================="
with open(tag+"_"+str(d)+".sym","w") as out:
out.write(sdef_string)
if 'symdef_check' in kwargs and kwargs['symdef_check']:
sdef = RosettaSymDef()
sdef.parse(sdef_string)
sdef.show("SYMDEF_"+tag)
for fn in FN:
fn.show(**kwargs) # dumb order hack for pymol up/dn
cmd.disable("all")
cmd.enable(tag+"_DEPTH%i"%(depth))
cmd.enable(tag+"_NODES%i"%(depth))
count = CountFrames()
symtrie.visit(count)
print "N Frames:",count.count
cmd.set_view(v)
def test_D4OCT(depth=4):
CELL = 30
G = [
# SymElem("C2",axis=Vec( 1,0,0),cen=Vec( 0 ,CELL/2.0, CELL/4.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(-CELL/6.0,CELL/6.0,-CELL/3.0)),
# SymElem("C2",axis=Vec(1,1,0),cen=CELL*Vec(0,0.0,0.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(0,0,0)),
SymElem("C2",axis=Vec(1,1,0),cen=Vec(0,0,CELL)),
SymElem("C3",axis=Vec(1,1,1),cen=Vec(0,0,CELL)),
SymElem("C4",axis=Vec(1,0,0),cen=Vec(0,0,CELL)),
SymElem("C4",axis=Vec(0,0,1)),
SymElem("C2",axis=Vec(1,0,0)),
SymElem("C2",axis=Vec(0,1,0)),
]
# for elem in G: print elem
symtrie = generate_sym_trie(G,depth=depth)
# buildcgo = BuildCGO( nodes=[ Vec(2,4,3), Vec(-6,-2,35), ] )
buildcgo = BuildCGO( nodes=[ Vec(-6,-2,CELL+5), Vec(2,4,3), ] )
# buildcgo = BuildCGO( nodes=[ Vec(-6,-2,35), ] )
# buildcgo = BuildCGO( nodes=[ Vec(2,4,3), ] )
symtrie.visit(buildcgo)
buildcgo.show()
def test_D2TET(depth=6, cell=60, **kwargs):
G = [
# SymElem("C2",axis=Vec( 1,0,0),cen=Vec( 0 ,cell/2.0, cell/4.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(-cell/6.0,cell/6.0,-cell/3.0)),
# SymElem("C2",axis=Vec(1,1,0),cen=cell*Vec(0,0.0,0.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(0,0,0)),
# SymElem("C2",axis=Vec(0,1,0)),
SymElem("C3", axis=Vec(1, 1, 1)),
# SymElem("C2",axis=Vec(0,1,0),cen=Vec(1,1,1)*cell/2.0), # other T
# SymElem("C3",axis=Vec(1,1,1),cen=Vec(1,1,1)*cell/2.0), # other T
# SymElem("C4",axis=Vec(1,0,0),cen=Vec(1,1,1)*cell/2.0),
SymElem("D2", cen=Vec(0, 0, cell / 2.0)),
# SymElem("D2",cen=Vec(0,cell/2.0,cell/2.0)), # other D2
]
# for elem in G: print elem
symtrie = generate_sym_trie(G, depth=depth)
buildcgo = BuildCGO(nodes=[], origin=Vec(0.5, 0.5, 0.5) * cell, **kwargs)
# buildcgo = BuildCGO( nodes=[ Vec(6,6,30), ] )
symtrie.visit(buildcgo)
buildcgo.show()
cube(Vec(0, 0, 0), cell * Vec(1, 1, 1))
for g in G:
print "show", g
g.show(radius=2.0, sphereradius=4.0)
def test_D2TET(depth=6,cell=60, **kwargs):
G = [
# SymElem("C2",axis=Vec( 1,0,0),cen=Vec( 0 ,cell/2.0, cell/4.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(-cell/6.0,cell/6.0,-cell/3.0)),
# SymElem("C2",axis=Vec(1,1,0),cen=cell*Vec(0,0.0,0.0)),
# SymElem("C3",axis=Vec(-1,1,1),cen=Vec(0,0,0)),
# SymElem("C2",axis=Vec(0,1,0)),
SymElem("C3",axis=Vec(1,1,1)),
# SymElem("C2",axis=Vec(0,1,0),cen=Vec(1,1,1)*cell/2.0), # other T
# SymElem("C3",axis=Vec(1,1,1),cen=Vec(1,1,1)*cell/2.0), # other T
# SymElem("C4",axis=Vec(1,0,0),cen=Vec(1,1,1)*cell/2.0),
SymElem("D2",cen=Vec(0,0,cell/2.0)),
# SymElem("D2",cen=Vec(0,cell/2.0,cell/2.0)), # other D2
]
# for elem in G: print elem
symtrie = generate_sym_trie(G,depth=depth)
buildcgo = BuildCGO( nodes=[ ], origin=Vec(0.5,0.5,0.5)*cell, **kwargs )
# buildcgo = BuildCGO( nodes=[ Vec(6,6,30), ] )
symtrie.visit(buildcgo)
buildcgo.show()
cube( Vec(0,0,0), cell*Vec(1,1,1) )
for g in G:
print "show",g
g.show(radius=2.0,sphereradius=4.0)
