Exemple #1
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    def learn(self, Xtrain, ytrain):
        
        #print self.usecolumnones
        # print(Xtrain)
        if not self.usecolumnones:     
            Xtrain = Xtrain[:,0:-1]
        # print Xtrain.shape[1]
        # print Xtrain
        num_features  = Xtrain.shape[1]     
        
        indices_1 = ytrain  == 1 
        indices_0 = ytrain  == 0
        self.prior_1 = float(sum(indices_1))/Xtrain.shape[0]
        self.prior_0 = 1.0 - self.prior_1
        for i in range(num_features):
            feature = Xtrain[:,i]
            numbers_0 = feature[indices_0]
            #print(numbers_0)
            mean = utils.mean(numbers_0)
            stdev = utils.stdev(numbers_0)
            self.meanvar_0.append([stdev**2, mean])
            numbers_1 = feature[indices_1]
            mean = utils.mean(numbers_1)
            stdev = utils.stdev(numbers_1)
            self.meanvar_1.append([stdev**2, mean])

        print self.meanvar_1, len(self.meanvar_1)
        print self.meanvar_0, len(self.meanvar_0)
Exemple #2
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    def learn(self, Xtrain, ytrain):
        """
        In the first code block, you should set self.numclasses and
        self.numfeatures correctly based on the inputs and the given parameters
        (use the column of ones or not).

        In the second code block, you should compute the parameters for each
        feature. In this case, they're mean and std for Gaussian distribution.
        """

        ### YOUR CODE HERE

        # check the number of classes
        num_of_classes = []
        for i in ytrain:
            if i not in num_of_classes:
                num_of_classes.append(i)

        # set numclasses and numfeatures
        self.numclasses = len(num_of_classes)
        self.numfeatures = (Xtrain.shape[1]) - 1
        if (self.params['usecolumnones'] == True):
            self.numfeatures += 1

        ### END YOUR CODE

        origin_shape = (self.numclasses, self.numfeatures)
        self.means = np.zeros(origin_shape)
        self.stds = np.zeros(origin_shape)

        ### YOUR CODE HERE

        # split data by class(y value is 0 or 1)
        class_0 = []
        class_1 = []
        for i in range(len(ytrain)):
            if ytrain[i] == 0:
                class_0.append(Xtrain[i])
            if ytrain[i] == 1:
                class_1.append(Xtrain[i])

        # mean and std for class_0
        for i in range(self.numfeatures):
            feature = []
            for j in range(len(class_0)):
                feature.append(class_0[j][i])
            self.means[0][i] = (utils.mean(feature))
            self.stds[0][i] = (utils.stdev(feature))

        # mean and std for class_1
        for i in range(self.numfeatures):
            feature = []
            for j in range(len(class_1)):
                feature.append(class_1[j][i])
            self.means[1][i] = (utils.mean(feature))
            self.stds[1][i] = (utils.stdev(feature))

        ### END YOUR CODE
        assert self.means.shape == origin_shape
        assert self.stds.shape == origin_shape
    def learn(self, Xtrain, ytrain):
        """ Learns using the traindata """
        if not self.getparams()['usecolumnones']:
            Xtrain = Xtrain[:, :-1]
        # print("Xtrain shape when useColumns is", self.getparams()['usecolumnones'], Xtrain.shape[1])
        noOfFeatures = Xtrain.shape[1]
        noOfSamples = len(ytrain)

        self.x_Class0 = []
        self.x_Class1 = []
        for i in range(noOfSamples):
            # print(ytrain[i])
            if ytrain[i] == 0:
                # print(i,"y=0")
                self.x_Class0.append(Xtrain[i])
            else:
                # print(i,"y=1")
                self.x_Class1.append(Xtrain[i])

        self.x_Class0 = np.asarray(self.x_Class0).reshape(len(self.x_Class0), Xtrain.shape[1])
        self.x_Class1 = np.asarray(self.x_Class1).reshape(len(self.x_Class1), Xtrain.shape[1])
        # print ("X_Class0.shape",self.x_Class0.shape)
        # print ("X_Class1.shape",self.x_Class1.shape)
        self.mean_Class0 = utils.mean(self.x_Class0)
        self.std_Class0 = utils.stdev(self.x_Class0)

        self.mean_Class1 = utils.mean(self.x_Class1)
        self.std_Class1 = utils.stdev(self.x_Class1)

        # print("mean_Class0.shape", self.mean_Class0.shape)
        # print("std_Class0.shape", self.std_Class0.shape)
        # print("mean_Class1.shape", self.mean_Class1.shape)
        # print("std_Class1.shape", self.std_Class1.shape)
        self.ymean_Class1 = utils.mean(ytrain)
        self.ymean_Class0 = 1 - self.ymean_Class1
Exemple #4
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    def learn(self, Xtrain, ytrain, obj):
        """ Learns using the traindata """
        """This part learns the prior of each class labels"""
        if self.usecolumnones == True:

            self.nof = Xtrain.shape[1]
        else:
            self.nof = Xtrain.shape[1] - 1

        postrain = Xtrain[ytrain == 0]
        negtrain = Xtrain[ytrain == 1]
        posprior = postrain.shape[0] / Xtrain.shape[0]
        negprior = negtrain.shape[0] / Xtrain.shape[0]
        self.prior_prob.extend((posprior, negprior))

        for i in range(0, self.nof):
            feature = "Feature" + str(i)
            a = {}
            for targDom in range(0, 2):
                parameters = {}
                parameters["mu"] = utils.mean(Xtrain[ytrain == targDom, i])
                parameters["sig"] = utils.stdev(Xtrain[ytrain == targDom, i])
                a[targDom] = parameters
            self.prob_table[feature] = a
        """Python implementation of Naive Bayes"""
Exemple #5
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    def calculate_mv(self, zero, one):
        feature_array = []
        for i in range(0, len(zero[0])):
            feature_array = []
            for j in range(0, len(zero)):
                feature_array.append(zero[j][i])
            self.mv0.append(
                [utils.mean(feature_array),
                 utils.stdev(feature_array)])

        for i in range(0, len(one[0])):
            feature_array = []
            for j in range(0, len(one)):
                feature_array.append(one[j][i])
            self.mv1.append(
                [utils.mean(feature_array),
                 utils.stdev(feature_array)])
 def learn(self, Xtrain, ytrain):
     self.features = Xtrain.shape[1]
     if not self.usecolumnones:
         self.features -= 1
         Xtrain = Xtrain[:,0:self.features]
     zeroindex = ytrain == 0
     self.priozero = float(sum(zeroindex)/Xtrain.shape[0])
     self.prioone = 1 - self.priozero
     classzero = Xtrain[zeroindex,:]
     classone = Xtrain[-zeroindex,:]
     self.meanstdev = np.empty((2,2,self.features))
     for f in xrange(self.features):
         data = classzero[:,f]
         self.meanstdev[0,0,f] = utils.mean(data)
         self.meanstdev[0,1,f] = utils.stdev(data)
         data = classone[:,f]
         self.meanstdev[1,0,f] = utils.mean(data)
         self.meanstdev[1,1,f] = utils.stdev(data)
Exemple #7
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    def predict(self, Xtest):
        xvec = np.dot(Xtest, self.weights)
        ytest = utils.sigmoid(xvec)
        ym = utils.mean(ytest)
        ytest[ytest >= ym] = 1     
        ytest[ytest < ym] = 0    
 	print("Logistic Q2:"),
        print time.time() - self.tlo

        return ytest
 def learn(self, Xtrain, ytrain):
     # Separate by class
     separated = {}
     for tt in range(Xtrain.shape[0]):
         inputv = Xtrain[tt]
         outputy = ytrain[tt]
         if outputy not in separated:
             separated[outputy] = []
         separated[outputy].append(inputv)
     for classValue, instances in separated.iteritems():
         summ = [(utils.mean(attribute), utils.stdev(attribute)) for attribute in zip(*instances)]
         del summ[-1]
         self.summaries[classValue] = summ
Exemple #9
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 def learn(self, Xtrain, ytrain):
     # Separate by class
     separated = {}
     for tt in range(Xtrain.shape[0]):
         inputv = Xtrain[tt]
         outputy = ytrain[tt]
         if (outputy not in separated):
             separated[outputy] = []
         separated[outputy].append(inputv)
     for classValue, instances in separated.iteritems():
         summ = [(utils.mean(attribute), utils.stdev(attribute))
                 for attribute in zip(*instances)]
         del summ[-1]
         self.summaries[classValue] = summ
 def divide(self, ds):
     dividedDS = [(utils.mean(x), utils.stdev(x)) for x in zip(*ds)]
     del dividedDS[-1]
     return dividedDS
Exemple #11
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 def makegroups(dataset):
     groups = [(utils.mean(attribute), utils.stdev(attribute)) for attribute in zip(*dataset)]
     return groups
    def divide(self,ds):
	dividedDS = [(utils.mean(x), utils.stdev(x)) for x in zip(*ds)]
	del dividedDS[-1]
	return dividedDS
Exemple #13
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 def end_game(self):
     self.mean_a = mean(self.a1)
     self.mean_a2 = mean(self.a2)
     self.mean_t1 = mean(self.time1)
     self.mean_t2 = mean(self.time2)
     self.mean_tC = mean(self.trap_body_c)