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Volume Projection is an extension for Slicer. Load volumes and perform maximum, minimum, mean, and standard deviation projections along any axis with customizable bounds.

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Volume Projection

Volume Projection is an extension for Slicer. The extension is a tool used to perform maximum, minimum, mean, and standard deviation projections along axial, sagittal, and coronal axes with customizable bounds.

Image of UI

Tutorial:

  1. In 3D-Slicer, navigate to the Sample Data Module
  2. Select the MRHead data set (Slicer will then download and import this set)

Image of Data Set

  1. Open the Volume Projection Module via Modules>Filtering>Volume Projection
  2. Select the MRHEAD volume with the input volume combo box

Select Input

  1. Create a volume with the output volume combo box

Create Output

  1. Customize the ROI

CustomizeROI

  1. Click the apply projection button to store the projection to the output volume

EndResult

Contained Modules:

ROIModule - Provides custom Slicer Annotation ROI to bound input volume

SimpleITK - Performs maximum, minimum, mean, and standard deviation projection operations

Crop Volume Module - Crops data from input volume based upon custom bounds

License: 3D Slicer License (https://github.com/Slicer/Slicer/blob/master/License.txt)

Collaborators: Nicholas Nguyen (SonoVol Inc.), Brian Fischer (SonoVol Inc.)

August 2020.

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Volume Projection is an extension for Slicer. Load volumes and perform maximum, minimum, mean, and standard deviation projections along any axis with customizable bounds.

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  • Python 81.7%
  • CMake 18.3%