Manifold Learning methods for Dimensionality Reduction and Spectral Clustering in Python
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andreamaf/manifoldLearn
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The present module manifoldLearn implements in Python programming language various algorithms performing nonlinear dimensionality reduction and so-called spectral clustering, based on a geometrically inspired and locality preserving criterion, particularly suited for data lying on a low-dimensional manifold embedded in a high-dimensional space. NB Isomap algorithm [7] is the only one pursuing a global optimal solution for nonlinear dimensionality reduction. References: [1] Weiss. Segmentation using eigenvectors: a unifying view. Proceedings IEEE International Conference on Computer Vision p. 975-982 (1999). [2] Belkin, Niyogi. Laplacian Eigenmaps and Spectral Techniques for Embedding and Clustering. Advances in Neural Information Processing Systems 14, 2001, p. 586-691, MIT Press. [3] Meila, Shi. A random walks view of spectral segmentation. 8th International Workshop on Artificial Intelligence and Statistics (AISTATS), 2001. [4] Donoho, Grimes. Hessian eigenmaps: Locally linear embedding techniques for high-dimensional data. Proc Natl Acad Sci U S A. 2003 May 13; 100(10): 5591–5596. [5] Roweis, Saul. Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science Vol 290, 22 December 2000, 2323–2326. [6] Saul, Roweis. An introduction to locally linear embedding. Technical Report, AT&T Labs and Gatsby Computational Neuroscience Unit, 2000. [7] Tenenbaum, de Silva, Langford. A Global Geometric Framework for Nonlinear Dimensionality Reduction. Science 290, (2000), 2319–2323. [8] Seung, Lee. The manifold ways of perception. Science 290, 2268-2269 (2000). [9] Ng, Jordan, Weiss. On spectral clustering: analysis and an algorithm. Advances in Neural Information Processing Systems, 2002, pp. 849-856.
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