Skip to content

edbosne/pyfdd

Repository files navigation

Corresponding scientific article: DOI

Corresponding PhD Thesis: Thesis

Repository archive on Zenodo: DOI

PyFDD

General usage notes

  • PyFDD is a software for fitting channeling data for lattice location;
  • Load your data into a Data Pattern to prepare the channeling data;
  • Import Simulations Libraries in the .2dl format;
  • Use the Fit Manager for fitting;
  • For learning how to use the API, start with the examples folder.

Using the standalone GUI application

  • Download the executable from github as use it as it is.

Data Pattern GUI Data Pattern GUI

Installation

To use PyFDD you must first have python3 and pip installed. If you download python from python.org and use a version >=3.4 it will come with pip.

pip version >= 19.3 is required.

To install PyFDD on linux run,

$ pip3 install git+https://github.com/edbosne/pyfdd.git#egg=pyfdd

To upgrade,

pip3 install --upgrade git+https://github.com/edbosne/pyfdd.git#egg=pyfdd

If you will be using it in jupyter, and you should, you can install it with

$ pip3 install jupyter

To launch a notebook use the command,

jupyter notebook

To install PyFDD on windows run (the command can be "py" or "python" depending on how you installed it),

$ python -m pip install https://github.com/edbosne/pyfdd/archive/master.zip

To upgrade an installed version use,

pip install --upgrade https://github.com/edbosne/pyfdd/archive/master.zip

If you will be using it in jupyter, and you should, you can install it with

$ py -m pip install jupyter

To launch a notebook use the command,

py -m notebook

Structure

  • The DataPattern class holds the pattern from the measurement, the angular calibration and has the necessary tools to set up the pattern for fitting.

  • The Lib2dl class reads 2dl libraries and puts them in the format that is necessary for the fit.

  • The Fit class does the fit. If one need to do one single fit for testing this class can be used but for regular analysis the FitManager class is advised.

  • The FitManager is the general purpose fit class and the most used in practice. It can fit a pattern over several lattice sites and outputs the results in a .csv file that can be opened with excel.

Licence

PyFDD is open source under a GPL3 license. Please look at the LICENCE.txt file for more info.