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MainWindow.py
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MainWindow.py
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import os
import sys
import cv2
import math
import pickle
import time
import numpy as np
import importlib
import odorscape
import server
import csv
import datetime
from PyQt5.QtCore import pyqtSlot
from PyQt5 import QtCore, QtGui, QtWidgets, uic
from PyQt5.QtWidgets import QFileDialog
from PyQt5.QtGui import QImage, QPixmap, QPainter, QColor, QBrush, QPen,QPolygonF
importlib.reload(server)
importlib.reload(odorscape)
cwd = os.getcwd()
mainWindowCreatorFile = cwd+"/ClosedLoop2.ui"
Ui_MainWindow, QtBaseClass = uic.loadUiType(mainWindowCreatorFile)
class ClosedLoop(QtWidgets.QMainWindow, Ui_MainWindow):
def __init__(self):
QtWidgets.QMainWindow.__init__(self)
Ui_MainWindow.__init__(self)
self.setupUi(self)
self.setWindowTitle('Closed Loop')
self.setFixedSize(self.size())
# self.connectRPiPB.clicked.connect(self.connectRPi)
# self.connectFictracPB.clicked.connect(self.connectFictrac)
self.loadGradientPB.clicked.connect(self.loadGradient)
self.gradientProfileSelectorPB.clicked.connect(self.loadGradient)
# self.edgeRulesPB.clicked.connect(self.defineEdgeRules)
self.replayPB.clicked.connect(self.replay)
self.runPB.clicked.connect(self.run)
# self.stopPB.clicked.connect(self.stop)
self.conditionalLEDStimulationRadioButton.clicked.connect(self.configurator)
self.fixedLEDStimulationRadioButton.clicked.connect(self.configurator)
self.noneLEDStimulationRadioButton.clicked.connect(self.configurator)
self.uwTrackingConditionRadioButton.clicked.connect(self.configurator)
self.noneConditionRadioButton.clicked.connect(self.configurator)
self.redLEDRadioButton.clicked.connect(self.configurator)
self.greenLEDRadioButton.clicked.connect(self.configurator)
self.gradientFlowCheckbox.clicked.connect(self.configurator)
self.constantFlowCheckbox.clicked.connect(self.configurator)
self.flowRateSpinbox.valueChanged.connect(self.configurator)
self.noneLEDStimulationRadioButton.setChecked(True)
self.noneConditionRadioButton.setChecked(True)
self.redLEDRadioButton.setChecked(True)
self.rpiIPTextEdit.setText("000.000.000.000")
self.rpiCOMMTextEdit.setText("00000")
self.localIPTextEdit.setText("000.000.000.000")
self.localCOMMTextEdit.setText("00000")
self.configurator()
def run(self):
self.configurator()
server.run_fictrac_client(self.config_dict, self.gradient)
def replay(self):
self.gradient=None
dialog = QFileDialog()
dialog.setDefaultSuffix(".pkl")
fname = dialog.getOpenFileName(self, 'Select Trial to Open', os.getcwd(), '(*.log)')[0]
self.playback = []
self.times = []
with open(fname) as f:
for idx, row in enumerate(f.read().split("\n")):
if idx==0:
pass
else:
try:
time, toks = row.split(" -- ")[0], row.split(" -- ")[1]
time = time.split("-")[1]
self.times.append(time)
toks = toks.split(', ')
# posx, posy, mfc1, mfc2, mfc3
self.playback.append([float(toks[1]),float(toks[2]),float(toks[4]),float(toks[5]),float(toks[6])])
except IndexError:
pass
server.run_fictrac_client(self.config_dict, self.gradient, replay=[self.times, self.playback])
def configurator(self):
if self.constantFlowCheckbox.isChecked():
self.gradientFlowCheckbox.setDisabled(True)
self.gradientProfileSelectorPB.setDisabled(True)
self.gradientProfileLabel.setDisabled(True)
self.gradient=None
if self.constantFlowCheckbox.isChecked()==False:
self.gradientFlowCheckbox.setDisabled(False)
self.gradientProfileSelectorPB.setDisabled(False)
self.gradientProfileLabel.setDisabled(False)
self.odor1ConcentrationLabel.setDisabled(False)
self.odor1ConcentrationSpinbox.setDisabled(False)
if self.gradientFlowCheckbox.isChecked():
self.constantFlowCheckbox.setDisabled(True)
self.odor1ConcentrationLabel.setDisabled(True)
self.odor1ConcentrationSpinbox.setDisabled(True)
if self.gradientFlowCheckbox.isChecked()==False:
self.constantFlowCheckbox.setDisabled(False)
if self.conditionalLEDStimulationRadioButton.isChecked():
self.ledIntensitySpinbox.setDisabled(False)
self.pulseDurationSpinbox.setDisabled(False)
self.initialDelaySpinbox.setDisabled(False)
self.pulsePeriodSpinbox.setDisabled(True)
self.postPulseLockSpinbox.setDisabled(False)
self.conditionThresholdSpinbox.setDisabled(False)
self.slidingWindowSpinbox.setDisabled(False)
if self.noneConditionRadioButton.isChecked():
self.postPulseLockSpinbox.setDisabled(True)
self.conditionThresholdSpinbox.setDisabled(True)
self.slidingWindowSpinbox.setDisabled(True)
if self.fixedLEDStimulationRadioButton.isChecked():
self.ledIntensitySpinbox.setDisabled(False)
self.pulseDurationSpinbox.setDisabled(False)
self.initialDelaySpinbox.setDisabled(False)
self.pulsePeriodSpinbox.setDisabled(False)
self.postPulseLockSpinbox.setDisabled(True)
self.conditionThresholdSpinbox.setDisabled(True)
self.slidingWindowSpinbox.setDisabled(True)
self.greenLEDRadioButton.setDisabled(False)
self.redLEDRadioButton.setDisabled(False)
if self.noneLEDStimulationRadioButton.isChecked():
self.ledIntensitySpinbox.setDisabled(True)
self.pulseDurationSpinbox.setDisabled(True)
self.initialDelaySpinbox.setDisabled(True)
self.pulsePeriodSpinbox.setDisabled(True)
self.postPulseLockSpinbox.setDisabled(True)
self.conditionThresholdSpinbox.setDisabled(True)
self.slidingWindowSpinbox.setDisabled(True)
self.greenLEDRadioButton.setDisabled(True)
self.redLEDRadioButton.setDisabled(True)
self.RPI_HOST = self.rpiIPTextEdit.toPlainText()
self.RPI_PORT = int(self.rpiCOMMTextEdit.toPlainText())
self.LOCAL_HOST = self.localIPTextEdit.toPlainText()
self.LOCAL_PORT = int(self.localCOMMTextEdit.toPlainText())
self.CONSTANT_FLOW = bool(self.constantFlowCheckbox.isChecked())
self.GRADIENT_FLOW = bool(self.gradientFlowCheckbox.isChecked())
self.MAX_FLOW_RATE = int(self.flowRateSpinbox.value())
if self.conditionalLEDStimulationRadioButton.isChecked():
self.LED_ACTIVATION_MODE = "conditional"
if self.fixedLEDStimulationRadioButton.isChecked():
self.LED_ACTIVATION_MODE = "temporal"
if self.noneLEDStimulationRadioButton.isChecked():
self.LED_ACTIVATION_MODE = None
if self.redLEDRadioButton.isChecked():
self.LED_COLOR = 'red'
if self.greenLEDRadioButton.isChecked():
self.LED_COLOR = 'green'
self.LED_INTENSITY = int(self.ledIntensitySpinbox.value())
self.LED_DURATION = float(self.pulseDurationSpinbox.value())
self.LED_INITIAL_DELAY = float(self.initialDelaySpinbox.value())
self.LED_PERIOD = float(self.pulsePeriodSpinbox.value())
self.LED_POST_ACT_LOCK = float(self.postPulseLockSpinbox.value())
self.LED_CONDITION_THRESHOLD = float(self.conditionThresholdSpinbox.value())
self.SLIDING_WINDOW_LENGTH = int(self.slidingWindowSpinbox.value())
self.PERCENT_ODOR1 = int(self.odor1ConcentrationSpinbox.value())
self.config_dict={"RPI_HOST":self.RPI_HOST,
"RPI_PORT":self.RPI_PORT,
"LOCAL_HOST":self.LOCAL_HOST,
"LOCAL_PORT":self.LOCAL_PORT,
"CONSTANT_FLOW":self.CONSTANT_FLOW,
"PERCENT_CONSTANT_ODOR1":self.PERCENT_ODOR1,
"GRADIENT_FLOW":self.GRADIENT_FLOW,
"MAX_FLOW_RATE":self.MAX_FLOW_RATE,
"LED_ACTIVATION_MODE":self.LED_ACTIVATION_MODE,
"LED_COLOR":self.LED_COLOR,
"LED_INTENSITY":self.LED_INTENSITY,
"LED_DURATION":self.LED_DURATION,
"LED_INITIAL_DELAY":self.LED_INITIAL_DELAY,
"LED_PERIOD":self.LED_PERIOD,
"LED_POST_ACT_LOCK":self.LED_POST_ACT_LOCK,
"LED_CONDITION_THRESHOLD":self.LED_CONDITION_THRESHOLD,
"SLIDING_WINDOW_LENGTH":self.SLIDING_WINDOW_LENGTH}
# def connectFictrac(self):
# #Bash command
#
# def connectRPi(self):
# # Bash Command
def loadGradient(self):
dialog = QFileDialog()
dialog.setDefaultSuffix(".pkl")
fname = dialog.getOpenFileName(self, 'Select Gradient to Open', os.getcwd(), '(*.pkl)')[0]
pickle_in = open(fname, "rb")
temp = pickle.load(pickle_in)
self.canvas = odorscape.Canvas(temp.w, temp.h, module=True)
self.canvas.airchannel = temp.airchannel
self.canvas.channel1 = temp.channel1
self.canvas.channel2 = temp.channel2
self.gradient = self.canvas.build_canvas()
self.gradientProfileLabel.setText(fname)
self.loadGradientLabel.setStyleSheet("background-color : rgb(0,255,0); color : green;")
if __name__ == "__main__":
app = QtWidgets.QApplication(sys.argv)
window = ClosedLoop()
window.show()
sys.exit(app.exec_())