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Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype

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Description

Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype

Documentation

https://neuropycon.github.io/neuropycon_doc/index.html

Installation

Requirements

ephypype works both with python2 and python3

  • numpy
  • scikit-learn
  • ipywidgets
  • matplotlib
  • pandas
  • mne
  • nipype
  • graphpype

Install package

Install ephypype

git clone https://github.com/neuropycon/ephypype.git
cd ephypype
sudo python setup.py develop
cd ..

Install graphpype

git clone https://github.com/neuropycon/graphpype.git
cd graphpype
pip install .
cd ..

Software

Freesurfer

  1. Download Freesurfer sotware:

https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall

  1. Follow the Installation instructions

https://surfer.nmr.mgh.harvard.edu/fswiki/LinuxInstall

MNE

  1. Download MNE sotware:

http://martinos.org/mne/dev/install_mne_c.html

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Neuropycon package of functions for electrophysiology analysis, can be used from graphpype and nipype

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