/
extractNformulas23D.py
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/
extractNformulas23D.py
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import sys
import glob
import math
import argparse
import numpy as np
import pandas as pd
sys.path.append("./common/")
import matinfmod
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("-d","--dir", help="input csv files root dir ", \
required=True, type=str)
parser.add_argument("-n", help="input formulas to dump defaul=10 ", \
required=False, type=int, default=10)
parser.add_argument("--abc", help="extract formula having A B C ", \
required=False, action="store_true", default=False)
args = parser.parse_args()
all_files = glob.glob(args.dir + "/*.csv_*")
print(all_files)
li = []
pd.set_option('display.max_rows', None)
pd.set_option('display.max_columns', None)
pd.set_option('display.width', None)
pd.set_option('display.max_colwidth', -1)
for filename in all_files:
dfi = pd.read_csv(filename, index_col=None, header=0)
dfi = dfi.sort_values('mse')
selectedi = dfi.head(1)
li.append(dfi)
df = pd.concat(li, axis=0, ignore_index=True)
if args.abc:
dfa = df[df['formulas'].str.contains("_A")]
dfb = dfa[dfa['formulas'].str.contains("_B")]
df = dfb[dfb['formulas'].str.contains("_C")]
df = df.sort_values('mse')
selected = df.head(args.n)
previousvalue = float("inf")
for f in selected[["formulas", "mse"]].values:
rmse = math.sqrt(f[1])
if rmse != previousvalue:
print(f[0], rmse)
previousvalue = rmse