DNscRNAseq

Raw fastq files can be found in Array Express under accession E-MTAB-9154

The data processed with cellRanger 2 and scanpy used in the scripts and the manuscript can be found here

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
README.md		README.md
all-dataset-integrations.ipynb		all-dataset-integrations.ipynb
diffexp.ipynb		diffexp.ipynb
figures.ipynb		figures.ipynb
figures_functions.py		figures_functions.py
gene_lists.py		gene_lists.py
monocle3-rot-regression.ipynb		monocle3-rot-regression.ipynb
monocle3-welch-regression.ipynb		monocle3-welch-regression.ipynb
preprocessing.ipynb		preprocessing.ipynb
saunders-preprocess.ipynb		saunders-preprocess.ipynb
welch-processing.ipynb		welch-processing.ipynb

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