mwfranklin / OMBBNetwork Public

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Data and scripts related to my two papers on the evolutionary relationships between barrels

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Name		Name	Last commit message	Last commit date
Latest commit History 130 Commits
CompStrDefns		CompStrDefns
InOut		InOut
NetworkGraphs		NetworkGraphs
NetworkViews		NetworkViews
OMBB_A3Mfiles @ feb526f		OMBB_A3Mfiles @ feb526f
PDBFiles		PDBFiles
PreSwapData		PreSwapData
data		data
v4DB_olddata		v4DB_olddata
.gitignore		.gitignore
.gitmodules		.gitmodules
16_18_E-2.xlsx		16_18_E-2.xlsx
AddHomologues.py		AddHomologues.py
AllData_DBv5.xlsx		AllData_DBv5.xlsx
BarrelChars85.txt		BarrelChars85.txt
BtwnBarrelMetric.py		BtwnBarrelMetric.py
BtwnBarrelsComp.R		BtwnBarrelsComp.R
BySizeAligns.xlsx		BySizeAligns.xlsx
CalcAvgSCVol.py		CalcAvgSCVol.py
CapturePNGs.py		CapturePNGs.py
CheckInOutFiles.py		CheckInOutFiles.py
CompCodesE-2.txt		CompCodesE-2.txt
CompCodesE-3.txt		CompCodesE-3.txt
ConservedHist.R		ConservedHist.R
ConservedHistProto.py		ConservedHistProto.py
CreateEdges.py		CreateEdges.py
CreateSubNetworks.py		CreateSubNetworks.py
DupPDBs_v6.txt		DupPDBs_v6.txt
FilterMultiEdges.py		FilterMultiEdges.py
FindMissingMSAs.py		FindMissingMSAs.py
GraphIntRptsByStrands.py		GraphIntRptsByStrands.py
HHBlits.pbs		HHBlits.pbs
HomoIntersections.txt		HomoIntersections.txt
IdentifyNumHomologues.py		IdentifyNumHomologues.py
InitialFiltering.py		InitialFiltering.py
IntRpts.py		IntRpts.py
IntRptsE-3.xlsx		IntRptsE-3.xlsx
MinEValueNonOMBB.py		MinEValueNonOMBB.py
MinMatrices.py		MinMatrices.py
NonOMBBEValues.txt		NonOMBBEValues.txt
OverlapingHomologues.xlsx		OverlapingHomologues.xlsx
ProcessPDBs.py		ProcessPDBs.py
ProtosOnly.cys		ProtosOnly.cys
README.md		README.md
RenumbEdgestoMatchPDB.py		RenumbEdgestoMatchPDB.py
SEP12_PrettyAlign.docx		SEP12_PrettyAlign.docx
ShowAlign.py		ShowAlign.py
Test.py		Test.py
WholeDB_v5.txt		WholeDB_v5.txt