Originally written by "m.j.louhivuori@rug.nl"

This package is distributed as-is under the GNU General Public License found in the file LICENSE.

A quick glance of the modules included gives:

Atom -- Molecular primitives, starting from atoms and building up to polypeptides etc. Can be used to build or store molecules.

aux -- Auxiliary functions. List intersections, quicksort etc.

Biology -- At the moment only parse_sequence().

Interface -- Front-end to external programs such as Pales.

IO -- Input/output interface for different data formats, e.g. PDB.

Library -- Dictionaries and translation codeces used to convert from one naming convention to another.

Linguistics -- Actual translators to do the job.

Logic -- Simple wrapper functions for chaining together complex logical expressions.

Math -- Mathematical algorithms.

mpi -- Multi-processor interface. (untested)

NMR -- NMR specific data structures. Dipolar coupligns etc.

Physics -- Algorithms to calculate various physical quantities from the center of mass to electrostatic potentials.

svd -- Implementation of Singular Value Decomposition.

Happy hacking!