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iQ FRAPPA Plugin

Draws the FRAPPA region on iQ images. This is especially useful for activation or stimulation experiments to see the targeted region. A copy of the image is created in the ImageList in which the FRAPPA ROI outline is drawn destructively onto the image by setting the pixel intensity to a high value.

photo stimulation
bleaching

This plugin is for presentation purposes. The FRAP analysis ImageJ plugin reliably guesses the FRAP location without the ROI metadata, and is recommended for quantitative work.

Installation

  1. Download a release and unzip in the plugins directory. Developers may instead want to clone this Git respository into the plugins directory.

  2. Plugins directory for iQ 2.5.0 and above: C:/Program Files/Andor Bioimaging/PythonEngine/Plugins/

    For iQ 2.4.4 and earlier: C:/Program Files/Andor Bioimaging/Plugins/

  3. (For iQ 2.5.0) The PIL module is broken, so first delete the folder C:\iQOpenSource\Python-2.6.6\Lib\site-packages\PIL-1.1.7-py2.6-win32 and install PIL 1.17 for Python 2.6

  4. Now when you restart / start the Python IDE you will always see this program in the plugins menu.

  5. To test, in iQ open a dataset from the data/ folder and rename it simply to demo_image

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Plugin for Andor iQ OpenSource (iQos) Python IDE

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