Draws the FRAPPA region on iQ images. This is especially useful for activation or stimulation experiments to see the targeted region. A copy of the image is created in the ImageList in which the FRAPPA ROI outline is drawn destructively onto the image by setting the pixel intensity to a high value.
This plugin is for presentation purposes. The FRAP analysis ImageJ plugin reliably guesses the FRAP location without the ROI metadata, and is recommended for quantitative work.
Download a release and unzip in the plugins directory. Developers may instead want to clone this Git respository into the plugins directory.
Plugins directory for iQ 2.5.0 and above:
C:/Program Files/Andor Bioimaging/PythonEngine/Plugins/
For iQ 2.4.4 and earlier:
C:/Program Files/Andor Bioimaging/Plugins/
(For iQ 2.5.0) The PIL module is broken, so first delete the folder
C:\iQOpenSource\Python-2.6.6\Lib\site-packages\PIL-1.1.7-py2.6-win32
and install PIL 1.17 for Python 2.6Now when you restart / start the Python IDE you will always see this program in the plugins menu.
To test, in iQ open a dataset from the
data/
folder and rename it simply todemo_image