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nidata - neuroimaging dataset download and formatting

Join the chat at https://gitter.im/nidata/nidata

Goals

The goal of this tool is to offer a simple interface for downloading, storing, and getting access to neuroimaging datasets. We want to:

  • Decrease the amount of time spent by data scientists in accessing new datasets
  • Decrease the difficulty of scientists in sharing their data with the world
  • Increase the visibility of available data

Data types

The types of data we wish to expose include:

  • MRI / fMRI / rsMRI / dMRI
  • EEG / ERP / MEG / ECoG

Dependencies

Because of the breadth of this package, dependencies could be far-ranging, increasing installation difficulty. In order to ease installation, this repository includes many minimal installs of other code-bases. Licenses for these codes are respective of each included package.

These packages include:

  • nilearn - Machine learning for neuroimaging, contains generic download tools and logic for accessing fMRI datasets
  • pymvpa -
  • nibabel - Tools for accessing many formats of MRI data

Installation

Clone this repository--no extra dependencies!

Usage

[NYI]

About

Set of tools for downloading and accessing open-license neuroimaging data in a consistent format.

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  • Python 100.0%