def index(page = 1):
samples = []
es_samples = None
page_offset = (app.config.get('ITEMS_PER_PAGE')*(page-1))
sample_count = 0
try:
if 'search' in request.args:
# @@ FIXME <- INJECTION PRONE!!!
query = request.args['search']
sample_count = es.count(query)
if sample_count > 0:
es_samples = es.lucene_search(query, start=page_offset, size=app.config.get('ITEMS_PER_PAGE'))
else:
sample_count = es.count()
if sample_count > 0:
es_samples = es.all(size=app.config.get('ITEMS_PER_PAGE'), start=page_offset)
for s in es_samples['hits']['hits']:
samples.append(s['_source'])
except TransportError:
flash(gettext('Error querying ElasticSearch database. Please check configuration.'))
page_count = int(ceil(sample_count/app.config.get('ITEMS_PER_PAGE')))
if page_count <= 1:
page_count = 1
pages = range(1, page_count+1)
return render_template('samples/index.html', sample_count=sample_count, samples=samples, pages=pages, page=page)
def index():
samples = []
sample_count = {
'total': 0,
'new': 0,
'processing': 0,
'ready': 0,
}
submissions = []
submission_samples = []
try:
# Overall Counts
sample_count = {
'total': es.count(),
'new': es.count('status:%d' % SAMPLE_STATUS_NEW),
'processing': es.count('status:%d' % SAMPLE_STATUS_PROCESSING),
'ready': es.count('status:%d' % SAMPLE_STATUS_PROCESSED),
}
# Latest submissions
update_submissions(current_user.id)
submissions = current_user.submissions.order_by(
Submission.timestamp.desc()).limit(15).all()
submission_samples = {}
for item in submissions:
if item.sample_uuid:
submission_samples[item.sample_uuid] = es.get(item.sample_uuid)
# Latest samples
if sample_count['total'] > 0:
es_samples = es.all(size=15)
for s in es_samples['hits']['hits']:
samples.append(s['_source'])
except TransportError:
flash(
gettext(
'Error querying ElasticSearch database. Please check configuration.'
))
return render_template('general/index.html',
sample_count=sample_count,
submissions=submissions,
submission_samples=submission_samples,
samples=samples)
def index():
samples = []
sample_count = {
'total': 0,
'new': 0,
'processing': 0,
'ready': 0,
}
submissions = []
submission_samples = []
try:
# Overall Counts
sample_count = {
'total': es.count(),
'new': es.count('status:%d' % SAMPLE_STATUS_NEW),
'processing': es.count('status:%d' % SAMPLE_STATUS_PROCESSING),
'ready': es.count('status:%d' % SAMPLE_STATUS_PROCESSED),
}
# Latest submissions
update_submissions(current_user.id)
submissions = current_user.submissions.order_by(Submission.timestamp.desc()).limit(15).all()
submission_samples = {}
for item in submissions:
if item.sample_uuid:
submission_samples[item.sample_uuid] = es.get(item.sample_uuid)
# Latest samples
if sample_count['total'] > 0:
es_samples = es.all(size=15)
for s in es_samples['hits']['hits']:
samples.append(s['_source'])
except TransportError:
flash(gettext('Error querying ElasticSearch database. Please check configuration.'))
return render_template('general/index.html', sample_count=sample_count, submissions=submissions, submission_samples=submission_samples, samples=samples)
def index(page=1):
samples = []
es_samples = None
page_offset = (app.config.get('ITEMS_PER_PAGE') * (page - 1))
sample_count = 0
try:
if 'search' in request.args:
# @@ FIXME <- INJECTION PRONE!!!
query = request.args['search']
sample_count = es.count(query)
if sample_count > 0:
es_samples = es.lucene_search(
query,
start=page_offset,
size=app.config.get('ITEMS_PER_PAGE'))
else:
sample_count = es.count()
if sample_count > 0:
es_samples = es.all(size=app.config.get('ITEMS_PER_PAGE'),
start=page_offset)
for s in es_samples['hits']['hits']:
samples.append(s['_source'])
except TransportError:
flash(
gettext(
'Error querying ElasticSearch database. Please check configuration.'
))
page_count = int(ceil(sample_count / app.config.get('ITEMS_PER_PAGE')))
if page_count <= 1:
page_count = 1
pages = range(1, page_count + 1)
return render_template('samples/index.html',
sample_count=sample_count,
samples=samples,
pages=pages,
page=page)
