def okay(self, evt):
global test
global depVar
global indVar
selected_files = ""
plateType = [""]
dataSelector = dataSelectionObject.dataSelecObj()
##dependent = ['Total Puncta 2'];
###dataSelector.setIndependentVariable('Well');
##dataSelector.setIndependentVariable('Neuronal Phenotype Neuron (n)')
descriptions = ("WT", "KO")
###pairs = {};
##pairs['Genotype'] = ('WT','KO');
##pairs['Marker'] = ('SynGluR2','GADGeph')
dependent = [depVar]
dataSelector.setIndependentVariable(indVar)
mode = "noalternate"
[dataSelector, iteratePair] = createGrpPairs(dataSelector, pairs, descriptions, mode)
for j in range(len(plateType)):
crossplatePrefix = plateType[j]
for ndependents in range(len(dependent)):
dataSelector.setDependentVariable(dependent[ndependents])
fileMarker = ""
dataDict = HTS_GroupDataExtractMySql(dataSelector, table)
if mode == "alternate":
csubplot = 5
rsubplot = 1
else:
rsubplot = 3
csubplot = round(len(selected_cohorts) / rsubplot) + 1
levels = ("Genotype", "Trt")
modeltype = [[1, 0], [0, 1], [1, 1]]
if test == "HTS_tTest":
print "running tTest"
statsStruct2 = HTS_Ttest(dataDict, "inplate", modeltype)
# statsStruct3=HTS_ANOVA(dataDict,'inplate',levels,modeltype,{False});
# statsStruct2 = HTS_Ttest(dataDict,'inplate',modeltype)
# statsStruct3=HTS_ANOVA(dataDict,selected_cohorts,'inplate',levels,modeltype,{False})
# statsStruct = HTS_distributionTest(dataDict,'inplate',modeltype,[])
# stastStruct = HTS_scatter(dataDict,'crossplate',modeltype,[],[],[])
print "done!!!!!!!!!!"
box.Add(TestPanel(self.frame), 0, wx.EXPAND)
box.Add(TestComboBox(self.frame), 0 , wx.EXPAND)
self.frame.SetSizer(box)
self.frame.Show()
if __name__ == '__main__':
import sys,os
#import run
#run.main(['', os.path.basename(sys.argv[0])] + sys.argv[1:])
app = MyApp()
app.MainLoop()
##########################################################3333
# program starts here
###############################################################################################3
selected_files =''
plateType = [''];
dataSelector = dataSelectionObject.dataSelecObj()
dependent = ['Total Puncta 2'];
#dataSelector.setIndependentVariable('Well');
dataSelector.setIndependentVariable('Neuronal Phenotype Neuron (n)')
descriptions=('WT','KO');
pairs = {};
pairs['Genotype'] = ('WT','KO');
pairs['Marker'] = ('SynGluR2','GADGeph')
mode = 'noalternate'
[dataSelector,iteratePair] = createGrpPairs(dataSelector,pairs,descriptions,mode);
for j in range(len(plateType)):
crossplatePrefix = plateType[j];
for ndependents in range(len(dependent)):
dataSelector.setDependentVariable(dependent[ndependents])
# if dataDict:
