def loadMapTask(clip):
value = clip.value
path = lpp.getLppDir()
mapFile = os.path.join(path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
#This isn't sufficient. I have to massage this to
#become acceptable to oct2py as a matlab struct of arrays
print "Cp1 %i" % value
lppObj = sio.loadmat(mapFile, squeeze_me=True,
struct_as_record=False)['map']
print "Cp2 %i" % value
struct = dict()
struct['nDim'] = lppObj.nDim
struct['knn'] = lppObj.knn
struct['knnGood'] = lppObj.knnGood
struct['mapped'] = lppObj.mapped
clip['lppObj'] = struct
print "Cp3 %i" % value
octave = Oct2Py()
path = lpp.getLppDir()
octave.addpath(path)
# octave.addpath(os.getcwd())
# mapping = octave.testFunc2(struct)
# print "mapping is %s" %(str(mapping))
# clip['mapping'] = mapping
return clip
def loadDefaultConfig():
cfg = dict()
cfg['debug'] = True
cfg['campaign'] = 3
cfg['timeout_sec'] = 120
cfg['nPointsForMedianSmooth'] = 48
cfg['blsMinPeriod'] = 0.5
cfg['blsMaxPeriod'] = 30
cfg['detrendType'] = 'PDC'
#Thermal resettling tends to bugger up the first day or so of K2 data
#It seems best to just cut out a chunk.
cfg['numInitialCadencesToIgnore'] = 50
#Vetting parameters
cfg['minSnrForDetection'] = 10.
cfg['maxLppForTransit'] = 10**-2.1
#How significant must centroid offset be to claim a false positive.
#This value is between 0 and 1. Higher values mean fewer false positives
cfg['minProbDiffImgCentroidForFail'] = 0.99
#The LPP mapping file is used by LPP to define the regions of param
#space where the transits cluster.
try:
path = lpp.getLppDir()
cfg['lppMapFilePath'] = os.path.join(
path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
except NameError:
cfg['lppMapFilePath'] = "NotNeeded"
davePath = os.path.join(os.environ['HOME'], "daveOutput", "")
cfg['modshiftBasename'] = davePath
cfg['onepageBasename'] = davePath
cfg['clipSavePath'] = davePath
#Location of the place all the light curves and TPF files are stored
cfg['dataStorePath'] = os.path.join(os.environ['HOME'], ".mastio/k2")
#Location of the model PRF fits files.
cfg['prfPath'] = os.path.join(os.environ['HOME'], ".mastio/keplerprf")
#My front end
tasks = """checkDirExistTask serveTask extractLightcurveTask
computeCentroidsTask rollPhaseTask cotrendSffDataTask detrendDataTask
fblsTask trapezoidFitTask vetTask plotTask saveClip""".split(
) # Jeff added plotTask
cfg['taskList'] = tasks
searchTaskList = """blsTask trapezoidFitTask modshiftTask
measureDiffImgCentroidsTask dispositionTask""".split()
cfg['searchTaskList'] = searchTaskList
cfg['keysToIgnoreWhenSaving'] = ["serve"]
return cfg
def loadDefaultConfig():
cfg = dict()
cfg['debug'] = True
cfg['campaign'] = 3
cfg['timeout_sec'] = 120
cfg['nPointsForMedianSmooth'] = 48
cfg['blsMinPeriod'] = 0.5
cfg['blsMaxPeriod'] = 30
#Thermal resettling tends to bugger up the first day or so of K2 data
#It seems best to just cut out a chunk.
cfg['numInitialCadencesToIgnore'] = 50
#Vetting parameters
cfg['minSnrForDetection'] = 10.
cfg['maxLppForTransit'] = 10**-2.1
#How significant must centroid offset be to claim a false positive.
#This value is between 0 and 1. Higher values mean fewer false positives
cfg['minProbDiffImgCentroidForFail'] = 0.99
#The LPP mapping file is used by LPP to define the regions of param
#space where the transits cluster.
try:
path = lpp.getLppDir()
cfg['lppMapFilePath'] = os.path.join(path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
except NameError:
cfg['lppMapFilePath'] = "NotNeeded"
davePath = os.path.join(os.environ['HOME'],"daveOutput","")
cfg['modshiftBasename'] = davePath
cfg['onepageBasename'] = davePath
cfg['clipSavePath'] = davePath
#Location of the place all the light curves and TPF files are stored
cfg['dataStorePath'] = os.path.join(os.environ['HOME'],".mastio/k2")
#Location of the model PRF fits files.
cfg['prfPath'] = os.path.join(os.environ['HOME'], ".mastio/keplerprf")
#My front end
tasks = """checkDirExistTask serveTask extractLightcurveTask
computeCentroidsTask rollPhaseTask cotrendSffDataTask detrendDataTask'
fblsTask trapezoidFitTask vetTask plotTask saveClip""".split() # Jeff added plotTask
cfg['taskList'] = tasks
searchTaskList = """blsTask trapezoidFitTask modshiftTask
measureDiffImgCentroidsTask dispositionTask""".split()
cfg['searchTaskList'] = searchTaskList
cfg['keysToIgnoreWhenSaving'] = ["serve"]
return cfg
def testTask(clip):
path = lpp.getLppDir()
octave = Oct2Py()
octave.addpath(path)
octave.addpath(os.getcwd())
mapFile = os.path.join(path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
total = octave.testFunc(mapFile)
clip['lpp'] = total
print clip['value'], total
return clip
def loadMultiEventConfig():
cfg = dict()
cfg['debug'] = True
cfg['campaign'] = 3
cfg['timeout_sec'] = 120
cfg['nPointsForMedianSmooth'] = 2*48
cfg['maxNumEvents'] = 10
cfg['blsMinPeriod'] = 0.5
cfg['blsMaxPeriod'] = 30
#Vetting parameters
cfg['minSnrForDetection'] = 10.
cfg['maxLppForTransit'] = 0.03
cfg['minCentroidSignifForFp'] = 3.0
#The LPP mapping file is used by LPP to define the regions of param
#space where the transits cluster.
path = lpp.getLppDir()
cfg['lppMapFilePath'] = \
os.path.join(path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
cfg['modshiftBasename'] = \
os.path.join(os.environ['HOME'],"daveOutput","modshift")
cfg['onepageBasename'] = \
os.path.join(os.environ['HOME'],"daveOutput","onepage")
#Location of the place all the light curves and TPF files are stored
cfg['dataStorePath'] = os.path.join(os.environ['HOME'],".mastio/k2")
#Location of the model PRF fits files.
cfg['prfPath'] = os.path.join(os.environ['HOME'], ".mastio/keplerprf")
#My front end
tasks = """pl.checkDirExistTask pl.serveTask pl.extractLightcurveTask
pl.computeCentroidsTask pl.rollPhaseTask pl.cotrendDataTask
pl.detrendDataTask singleEventSearchTask pl.saveOnError""".split()
cfg['taskList'] = tasks
cfg['singleEventTaskList'] = "blsTask trapezoidFitTask vetTask".split()
cfg['clipSavePath'] = "./clips"
cfg['keysToIgnoreWhenSaving'] = ["serve"]
return cfg
def loadMultiEventConfig():
cfg = dict()
cfg['debug'] = True
cfg['campaign'] = 3
cfg['timeout_sec'] = 120
cfg['nPointsForMedianSmooth'] = 2 * 48
cfg['maxNumEvents'] = 10
cfg['blsMinPeriod'] = 0.5
cfg['blsMaxPeriod'] = 30
#Vetting parameters
cfg['minSnrForDetection'] = 10.
cfg['maxLppForTransit'] = 0.03
cfg['minCentroidSignifForFp'] = 3.0
#The LPP mapping file is used by LPP to define the regions of param
#space where the transits cluster.
path = lpp.getLppDir()
cfg['lppMapFilePath'] = \
os.path.join(path, "octave/maps/mapQ1Q17DR24-DVMed6084.mat")
cfg['modshiftBasename'] = \
os.path.join(os.environ['HOME'],"daveOutput","modshift")
cfg['onepageBasename'] = \
os.path.join(os.environ['HOME'],"daveOutput","onepage")
#Location of the place all the light curves and TPF files are stored
cfg['dataStorePath'] = os.path.join(os.environ['HOME'], ".mastio/k2")
#Location of the model PRF fits files.
cfg['prfPath'] = os.path.join(os.environ['HOME'], ".mastio/keplerprf")
#My front end
tasks = """pl.checkDirExistTask pl.serveTask pl.extractLightcurveTask
pl.computeCentroidsTask pl.rollPhaseTask pl.cotrendDataTask
pl.detrendDataTask singleEventSearchTask pl.saveOnError""".split()
cfg['taskList'] = tasks
cfg['singleEventTaskList'] = "blsTask trapezoidFitTask vetTask".split()
cfg['clipSavePath'] = "./clips"
cfg['keysToIgnoreWhenSaving'] = ["serve"]
return cfg
