def feedback(request, template_name='feedback.html'):
if request.method == 'POST': # If the form has been submitted...
form = ContactForm(request.POST)
if form.is_valid(): # All validation rules pass
subject = request.POST.get('topic', '').encode('ascii', 'ignore')
name = request.POST.get('name', '').encode('ascii', 'ignore')
message = request.POST.get('message', '').encode('ascii', 'ignore')
from_email = request.POST.get('email', '')
emails_to_feedback = []
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
message_admin = "Name: " + str(name) + "\nEmail: " + from_email + "\n\nMessage:\n" + str(message)
message = "Dear " + name + ",\n\nThank you for giving us your feedback.\n\nYour message will be analyzed by EMIF Catalogue team.\n\nMessage sent:\n" + str(message) + "\n\nSincerely,\nEMIF Catalogue"
# Send email to admins
send_custom_mail(subject, message_admin, settings.DEFAULT_FROM_EMAIL, emails_to_feedback)
# Send email to user with the copy of feedback message
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL, [from_email])
except BadHeaderError:
return HttpResponse('Invalid header found.')
return feedback_thankyou(request)
else:
form = ContactForm() # An unbound form
if request.user.is_authenticated():
form=ContactForm(initial={'name': request.user.get_full_name(),'email':request.user.email})
return render(request, template_name, {'form': form, 'request': request, 'breadcrumb': True})
def close(issue_number, send_mail=False):
try:
bugreport = BugReport.open.get(issue=issue_number)
bugreport.closed = True
bugreport.close_date = timezone.now()
if send_mail:
send_custom_mail(
'EMIF Catalogue: Bug Report #%d solved' % (issue_number),
""" Dear %s,\n\n
The following bug report:\n
<blockquote>
%s\n
</blockquote>
has been solved by our development team, and will be incorporated in our next scheduled system update.
\n\n
Sincerely,\n
EMIF Catalogue
""" % (bugreport.requester.get_full_name(), bugreport.report),
settings.DEFAULT_FROM_EMAIL, [bugreport.requester.email])
bugreport.save()
except BugReport.DoesNotExist:
pass
def sendCommitEmails(p, pv):
emails = [p.owner.email]
adict = dict(settings.ADMINS)
for admin in adict:
emails.append(adict[admin])
desc = ""
if pv.submitted_desc:
desc = """
The following description was added:\n
"
%s
" """ % (pv.submitted_desc)
# sent email to admin and developer about plugin
try:
send_custom_mail(
'EMIF Catalogue: Plugin %s v.%s submitted for approval' %
(p.name, pv.version), """Dear Colleague,\n
A new plugin version %s for plugin %s has been submitted for approval on the platform <a href="http://bioinformatics.ua.pt/emif">EMIF Catalogue</a>.
%s
The system administrators will review and approve it as soon as possible.\n
\n\n
\n\nSincerely,\nEMIF Catalogue
""" % (pv.version, p.name, desc), settings.DEFAULT_FROM_EMAIL,
emails)
except:
print "Couldn't send email for commit approval"
def report_bug(request):
if request.method == 'POST': # If the form has been submitted...
form = BugReportForm(request.POST)
if form.is_valid(): # All validation rules pass
title = request.POST.get('title', '').encode('ascii', 'ignore')
name = request.user.get_full_name()
description = "<strong>Description: </strong>" + request.POST.get(
'description', '').encode('ascii', 'ignore')
description += "\n<strong>Steps to reproduce: </strong>" + request.POST.get(
'steps', '').encode('ascii', 'ignore')
description += "\n<strong>Expected result: </strong>" + request.POST.get(
'expected', '').encode('ascii', 'ignore')
description += "\n<strong>Priority: </strong>" + request.POST.get(
'priority', '').encode('ascii', 'ignore')
from_email = request.user.email
issue = IssueManager(settings.GITHUB_USERNAME,
settings.GITHUB_PASSWD)
browser = ''
try:
browser = request.META['HTTP_USER_AGENT']
except:
pass
description = description + "\n\nReported by %s, email: %s with: %s" % (
name, from_email, browser)
newissue = issue.create(title, description)
if newissue.number != None:
br = BugReport(issue=newissue.number,
requester=request.user,
report=description)
br.save()
emails_to_feedback = [from_email]
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
send_custom_mail(title, description,
settings.DEFAULT_FROM_EMAIL,
emails_to_feedback)
except:
pass
return feedback_thankyou(request)
else:
form = BugReportForm() # An unbound form
return render(request, 'bugreport.html', {
'form': form,
'request': request,
'breadcrumb': True
})
def sendNotification(timeframe,
destiny,
origin,
href,
message,
custom_mail_message=None):
notification = None
timeout = timezone.now() - timeframe
existing_notifications = Notification.objects.filter(
destiny=destiny,
origin=origin,
href=href,
notification=message,
created_date__gt=timeout).order_by("-created_date")
# if theres notifications inside the time frame, just update it
if len(existing_notifications) >= 1:
notification = existing_notifications[0]
notification.created_date = timezone.now()
notification.removed = False
notification.read = False
notification.read_date = None
notification.save()
else:
# if theres no notification inside the time frame create a new one
notification = Notification(destiny=destiny,
origin=origin,
href=href,
notification=message)
notification.save()
if notification != None and notification.destiny.emif_profile.mail_not == True:
subject = None
message = None
if custom_mail_message != None:
(subject, message) = custom_mail_message
else:
subject = "EMIF Catalogue: Notification"
message = """Dear %s,\n\n
\n\n
%s\n\n
You can see it <a href="%s%s">here</a>.
\n\nSincerely,\nEMIF Catalogue
""" % (notification.destiny.get_full_name(),
notification.notification, settings.BASE_URL,
notification.href)
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL,
[notification.destiny.email])
def invitedb(request, db_id, template_name="sharedb.html"):
email = request.POST.get('email', '')
message_write = request.POST.get('message', '')
if (email == None or email == ''):
return HttpResponse('Invalid email address.')
fingerprint = None
try:
fingerprint = Fingerprint.objects.get(fingerprint_hash=db_id)
except Fingerprint.DoesNotExist:
print "Fingerprint with id " + db_id + " does not exist."
return HttpResponse("Service Unavailable")
subject = "EMIF Catalogue: A new database is trying to be shared with you."
link_invite = settings.BASE_URL + "accounts/signup/"
#message = """Dear %s,\n\n
# \n
# %s is sharing a new database with you on Emif Catalogue.
# First you must register on the EMIF Catalogue. Please follow the link below: \n\n
# %s
# \n\nSincerely,\nEMIF Catalogue
#""" % (email,request.user.get_full_name(), link_invite)
message = """%s\n
To have full access to this fingerprint, please register in the EMIF Catalogue following the link below: \n\n
%s
\n\nSincerely,\nEMIF Catalogue
""" % (message_write, link_invite)
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL, [email])
pend = None
try:
pend = InvitePending.objects.get(fingerprint=fingerprint, email=email)
return HttpResponse("User already has been invited to join catalogue")
except:
pass
pend = InvitePending(fingerprint=fingerprint, email=email)
pend.save()
return HttpResponse(
"An invitation has been sent to the user email so he can signup on catalogue"
)
def feedback(request, template_name='feedback.html'):
if request.method == 'POST': # If the form has been submitted...
form = ContactForm(request.POST)
if form.is_valid(): # All validation rules pass
subject = request.POST.get('topic', '').encode('ascii', 'ignore')
name = request.POST.get('name', '').encode('ascii', 'ignore')
message = request.POST.get('message', '').encode('ascii', 'ignore')
from_email = request.POST.get('email', '')
emails_to_feedback = []
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
message_admin = "Name: " + str(
name) + "\nEmail: " + from_email + "\n\nMessage:\n" + str(
message)
message = "Dear " + name + ",\n\nThank you for giving us your feedback.\n\nYour message will be analyzed by EMIF Catalogue team.\n\nMessage sent:\n" + str(
message) + "\n\nSincerely,\nEMIF Catalogue"
# Send email to admins
send_custom_mail(subject, message_admin,
settings.DEFAULT_FROM_EMAIL,
emails_to_feedback)
# Send email to user with the copy of feedback message
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL,
[from_email])
except BadHeaderError:
return HttpResponse('Invalid header found.')
return feedback_thankyou(request)
else:
form = ContactForm() # An unbound form
if request.user.is_authenticated():
form = ContactForm(initial={
'name': request.user.get_full_name(),
'email': request.user.email
})
return render(request, template_name, {
'form': form,
'request': request,
'breadcrumb': True
})
def invitedb(request, db_id, template_name="sharedb.html"):
email = request.POST.get('email', '')
message_write = request.POST.get('message', '')
if (email == None or email==''):
return HttpResponse('Invalid email address.')
fingerprint = None
try:
fingerprint = Fingerprint.objects.get(fingerprint_hash=db_id)
except Fingerprint.DoesNotExist:
print "Fingerprint with id "+db_id+" does not exist."
return HttpResponse("Service Unavailable")
subject = "EMIF Catalogue: A new database is trying to be shared with you."
link_invite = settings.BASE_URL + "accounts/signup/"
#message = """Dear %s,\n\n
# \n
# %s is sharing a new database with you on Emif Catalogue.
# First you must register on the EMIF Catalogue. Please follow the link below: \n\n
# %s
# \n\nSincerely,\nEMIF Catalogue
#""" % (email,request.user.get_full_name(), link_invite)
message = """%s\n
To have full access to this fingerprint, please register in the EMIF Catalogue following the link below: \n\n
%s
\n\nSincerely,\nEMIF Catalogue
""" % (message_write, link_invite)
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL, [email])
pend = None
try:
pend = InvitePending.objects.get(fingerprint=fingerprint, email=email)
return HttpResponse("User already has been invited to join catalogue")
except:
pass
pend = InvitePending(fingerprint=fingerprint, email=email)
pend.save()
return HttpResponse("An invitation has been sent to the user email so he can signup on catalogue")
def sendNotification(timeframe, destiny, origin, href, message, custom_mail_message=None):
notification = None
timeout = timezone.now() - timeframe
existing_notifications = Notification.objects.filter(destiny = destiny, origin = origin, href=href,
notification=message, created_date__gt=timeout).order_by("-created_date")
# if theres notifications inside the time frame, just update it
if len(existing_notifications) >= 1:
notification = existing_notifications[0]
notification.created_date = timezone.now()
notification.removed = False
notification.read = False
notification.read_date = None
notification.save()
else:
# if theres no notification inside the time frame create a new one
notification = Notification(destiny = destiny, origin = origin, href=href,
notification=message)
notification.save()
if notification != None and notification.destiny.emif_profile.mail_not == True:
subject = None
message = None
if custom_mail_message != None:
(subject, message) = custom_mail_message
else:
subject = "EMIF Catalogue: Notification"
message = """Dear %s,\n\n
\n\n
%s\n\n
You can see it <a href="%s%s">here</a>.
\n\nSincerely,\nEMIF Catalogue
""" % (notification.destiny.get_full_name(), notification.notification, settings.BASE_URL
,notification.href)
send_custom_mail(subject,
message, settings.DEFAULT_FROM_EMAIL,
[notification.destiny.email])
def post(self, request, *args, **kw):
if request.user.is_authenticated():
success = False
private_link = request.POST.get('plid', -1)
emails = request.POST.getlist('emails[]', [])
try:
plink = PublicFingerprintShare.objects.get(id=private_link)
if len(emails) > 0:
fname = plink.fingerprint.findName()
message = """Dear Colleague,\n
%s shared with you a private link to their database "%s" on the platform <a href="http://bioinformatics.ua.pt/emif">EMIF Catalogue</a>. \n\n
The database can be visualised in the link below:\n
<a href="%s">%s</a>\n\n
\n\nSincerely,\nEMIF Catalogue
""" % (request.user.get_full_name(), fname,
settings.BASE_URL + 'public/fingerprint/' +
plink.hash, fname)
try:
send_custom_mail(
"EMIF Catalogue: A private link for a database is being shared with you.",
message, settings.DEFAULT_FROM_EMAIL, emails)
success = True
except:
print "-- Error: Couldn't send the email for private link sharing"
except PublicFingerprintShare.DoesNotExist:
print "-- Error: Retrieving public fingerprint share"
response = Response({'success': success},
status=status.HTTP_200_OK)
else:
response = Response({}, status=status.HTTP_403_FORBIDDEN)
return response
def post(self, request, *args, **kw):
if request.user.is_authenticated():
success=False
private_link = request.POST.get('plid', -1)
emails = request.POST.getlist('emails[]', [])
try:
plink = PublicFingerprintShare.objects.get(id=private_link)
if len(emails)>0:
fname = plink.fingerprint.findName()
message = """Dear Colleague,\n
%s shared with you a private link to their database "%s" on the platform <a href="http://bioinformatics.ua.pt/emif">EMIF Catalogue</a>. \n\n
The database can be visualised in the link below:\n
<a href="%s">%s</a>\n\n
\n\nSincerely,\nEMIF Catalogue
""" % (request.user.get_full_name(), fname, settings.BASE_URL+'public/fingerprint/'+plink.hash, fname)
try:
send_custom_mail("EMIF Catalogue: A private link for a database is being shared with you.",
message, settings.DEFAULT_FROM_EMAIL, emails)
success=True
except:
print "-- Error: Couldn't send the email for private link sharing"
except PublicFingerprintShare.DoesNotExist:
print "-- Error: Retrieving public fingerprint share"
response = Response({'success': success}, status=status.HTTP_200_OK)
else:
response = Response({}, status=status.HTTP_403_FORBIDDEN)
return response
def report_bug(request):
if request.method == 'POST': # If the form has been submitted...
form = BugReportForm(request.POST)
if form.is_valid(): # All validation rules pass
title = request.POST.get('title', '').encode('ascii', 'ignore')
name = request.user.get_full_name()
description = "<strong>Description: </strong>"+request.POST.get('description', '').encode('ascii', 'ignore')
description += "\n<strong>Steps to reproduce: </strong>"+request.POST.get('steps', '').encode('ascii', 'ignore')
description += "\n<strong>Expected result: </strong>"+request.POST.get('expected', '').encode('ascii', 'ignore')
description += "\n<strong>Priority: </strong>"+request.POST.get('priority', '').encode('ascii', 'ignore')
from_email = request.user.email
issue = IssueManager(settings.GITHUB_USERNAME, settings.GITHUB_PASSWD)
browser = ''
try:
browser = request.META['HTTP_USER_AGENT']
except:
pass
description = description + "\n\nReported by %s, email: %s with: %s" % (name, from_email, browser)
issue.create(title, description)
emails_to_feedback = [from_email]
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
send_custom_mail(title, description, settings.DEFAULT_FROM_EMAIL, emails_to_feedback)
except:
pass
return feedback_thankyou(request)
else:
form = BugReportForm() # An unbound form
return render(request, 'bugreport.html', {'form': form, 'request': request, 'breadcrumb': True})
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
message = """%s
Now you're able to edit and manage the database. \n\n
To activate the database in your account, please open this link:
%s
\n\nSincerely,\nEMIF Catalogue
""" % (message, link_activation)
# Send email to admins
#send_mail(subject, message, settings.DEFAULT_FROM_EMAIL, emails_to_feedback)
# Send email to user with the copy of feedback message
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL,
[from_email])
except BadHeaderError:
return HttpResponse('Service Unavailable')
return HttpResponse(success_msg)
def sharedb_activation(request,
activation_code,
template_name="sharedb_invited.html"):
return activate_user(activation_code,
request.user,
context=request,
template_name=template_name)
for k, v in settings.ADMINS:
emails_to_feedback.append(v)
try:
message = """%s
Now you're able to edit and manage the database. \n\n
To activate the database in your account, please open this link:
%s
\n\nSincerely,\nEMIF Catalogue
""" % (message,link_activation)
# Send email to admins
#send_mail(subject, message, settings.DEFAULT_FROM_EMAIL, emails_to_feedback)
# Send email to user with the copy of feedback message
send_custom_mail(subject, message, settings.DEFAULT_FROM_EMAIL, [from_email])
except BadHeaderError:
return HttpResponse('Service Unavailable')
return HttpResponse(success_msg)
def sharedb_activation(request, activation_code, template_name="sharedb_invited.html"):
return activate_user(activation_code, request.user, context = request, template_name=template_name)
def export_all_answers(request):
"""
Method to export all databases answers to a csv file
"""
