def init(url, engine_options=None, create_tables=False):
"""Connect mappings to the database"""
# Load the appropriate db module
engine_options = engine_options or {}
engine = build_engine(url, engine_options)
result = ModelMapping([install_model], engine=engine)
# Create tables if needed
if create_tables:
metadata.create_all(bind=engine)
# metadata.engine.commit()
result.create_tables = create_tables
# load local galaxy security policy
return result
def init( url, engine_options={}, create_tables=False ):
"""Connect mappings to the database"""
# Load the appropriate db module
engine = build_engine( url, engine_options )
# Connect the metadata to the database.
metadata.bind = engine
result = ModelMapping( [ install_model ], engine=engine )
# Create tables if needed
if create_tables:
metadata.create_all()
# metadata.engine.commit()
result.create_tables = create_tables
#load local galaxy security policy
return result
def init(file_path, url, engine_options={}, create_tables=False):
"""Connect mappings to the database"""
# Create the database engine
engine = build_engine(url, engine_options)
# Connect the metadata to the database.
metadata.bind = engine
result = ModelMapping([tool_shed.webapp.model], engine=engine)
if create_tables:
metadata.create_all()
result.create_tables = create_tables
# Load local tool shed security policy
result.security_agent = CommunityRBACAgent(result)
result.shed_counter = shed_statistics.ShedCounter(result)
return result
def init(file_path, url, engine_options={}, create_tables=False):
"""Connect mappings to the database"""
# Create the database engine
engine = build_engine(url, engine_options)
# Connect the metadata to the database.
metadata.bind = engine
result = ModelMapping([galaxy.webapps.tool_shed.model], engine=engine)
if create_tables:
metadata.create_all()
result.create_tables = create_tables
# Load local tool shed security policy
result.security_agent = CommunityRBACAgent(result)
result.shed_counter = shed_statistics.ShedCounter(result)
result.hgweb_config_manager = galaxy.webapps.tool_shed.util.hgweb_config.HgWebConfigManager()
return result