def homepage(self):
"""
Extract an URL for that researcher (if any)
"""
lst = jpath('orcid-profile/orcid-bio/researcher-urls/researcher-url', self.json, default=[])
for url in lst:
val = jpath('url/value', url)
name = jpath('url-name/value', url)
if name is not None and ('home' in name.lower() or 'personal' in name.lower()):
return urlize(val)
if len(lst):
return urlize(jpath('url/value', lst[0])) or None
def homepage(self):
"""
Extract an URL for that researcher (if any)
"""
lst = jpath('person/researcher-urls/researcher-url',
self.json,
default=[])
for url in lst:
val = jpath('url/value', url)
name = jpath('url-name', url)
if name is not None and ('home' in name.lower()
or 'personal' in name.lower()):
return urlize(val)
if len(lst):
return urlize(jpath('url/value', lst[0])) or None
def test_urlize(self):
self.assertEqual(urlize('gnu.org'), 'http://gnu.org')
self.assertTrue(urlize(None) is None)
self.assertEqual(urlize(u'https://gnu.org'), 'https://gnu.org')
def search_by_name(first, last, instance=settings.ORCID_BASE_DOMAIN):
"""
Searches for an ORCID profile matching this (first,last) name.
Returns a list of such ORCID profiles.
"""
# Validate arguments
if not last:
return
# Perform query
base_base_pub = "https://pub." + instance + "/"
baseurl = base_base_pub + 'v1.2/search/orcid-bio/'
dct = {
'rows': 10,
'start': 0,
'q': 'family-name:%s given-names:%s' % (last, first),
}
url = baseurl + '?' + urlencode(dct)
try:
r = requests.get(url)
# the namespace is the same for both the production and the
# sandbox versions.
ns = {'ns': 'http://www.orcid.org/ns/orcid'}
xml = etree.fromstring(r.text.encode('utf-8'))
for elem in xml.xpath('//ns:orcid-search-result', namespaces=ns):
candidateFirst = None
candidateLast = None
# Get name
pers_details = elem.xpath('.//ns:personal-details',
namespaces=ns)
if not pers_details:
continue
for item in pers_details[0]:
if item.tag.endswith('given-names'):
candidateFirst = item.text
elif item.tag.endswith('family-name'):
candidateLast = item.text
if not candidateFirst or not candidateLast:
continue
# Check that the names are compatible
if shallower_name_similarity(
(first, last), (candidateFirst, candidateLast)) == 0:
continue
# Get ORCID iD
orcid_elem = elem.xpath(
'./ns:orcid-profile/ns:orcid-identifier/ns:path',
namespaces=ns)
if not orcid_elem:
continue
orcid = orcid_elem[0].text
# Add other things
lst = elem.xpath(
'./ns:orcid-profile/ns:orcid-bio/ns:researcher-urls/ns:researcher-url/ns:url/text()',
namespaces=ns)
homepage = None
for url in lst:
homepage = urlize(url)
break
keywords = elem.xpath(
'./ns:orcid-profile/ns:orcid-bio/ns:keywords/ns:keyword/text()',
namespaces=ns)
yield {
'first': candidateFirst,
'last': candidateLast,
'orcid': orcid,
'homepage': homepage,
'keywords': keywords,
}
except etree.XMLSyntaxError as e:
print e
except requests.exceptions.RequestException as e:
print e
def search_by_name(first, last):
"""
Searches for an ORCID profile matching this (first,last) name.
Returns a list of such ORCID profiles.
"""
# Validate arguments
if not last:
return
# Perform query
baseurl = 'http://pub.orcid.org/v1.2/search/orcid-bio/'
dct = {
'rows':10,
'start':0,
'q':'family-name:%s given-names:%s' % (last,first),
}
url = baseurl+'?'+urlencode(dct)
try:
r = requests.get(url)
ns = {'ns':'http://www.orcid.org/ns/orcid' }
xml = etree.fromstring(r.text.encode('utf-8'))
for elem in xml.xpath('//ns:orcid-search-result', namespaces=ns):
candidateFirst = None
candidateLast = None
# Get name
pers_details = elem.xpath('.//ns:personal-details', namespaces=ns)
if not pers_details:
continue
for item in pers_details[0]:
if item.tag.endswith('given-names'):
candidateFirst = item.text
elif item.tag.endswith('family-name'):
candidateLast = item.text
if not candidateFirst or not candidateLast:
continue
# Check that the names are compatible
if shallower_name_similarity((first,last),(candidateFirst,candidateLast)) == 0:
continue
# Get ORCID iD
orcid_elem = elem.xpath('./ns:orcid-profile/ns:orcid-identifier/ns:path', namespaces=ns)
if not orcid_elem:
continue
orcid = orcid_elem[0].text
# Add other things
lst = elem.xpath('./ns:orcid-profile/ns:orcid-bio/ns:researcher-urls/ns:researcher-url/ns:url/text()', namespaces=ns)
homepage = None
for url in lst:
homepage = urlize(url)
break
keywords = elem.xpath('./ns:orcid-profile/ns:orcid-bio/ns:keywords/ns:keyword/text()', namespaces=ns)
yield {
'first':candidateFirst,
'last':candidateLast,
'orcid':orcid,
'homepage':homepage,
'keywords':keywords,
}
except etree.XMLSyntaxError as e:
print e
except requests.exceptions.RequestException as e:
print e
