Esempi in Python per min_ungap_length_discard

Esempio n. 1

File: test_transform.py Progetto: pansapiens/seqmagick

 def test_partial(self):
     result = transform.min_ungap_length_discard(self.sequences, 4)
     self.assertEqual([self.sequences[1], self.sequences[3]], list(result))

Esempio n. 2

File: test_transform.py Progetto: pansapiens/seqmagick

 def test_none_pass(self):
     result = list(transform.min_ungap_length_discard(self.sequences, 8))
     self.assertEqual([], result)

Esempio n. 3

File: test_transform.py Progetto: pansapiens/seqmagick

 def test_all_pass(self):
     result = list(transform.min_ungap_length_discard(self.sequences, 0))
     self.assertEqual(self.sequences, result)

Esempio n. 4

File: test_transform.py Progetto: yimsea/seqmagick

 def test_partial(self):
     result = transform.min_ungap_length_discard(self.sequences, 4)
     self.assertEqual([self.sequences[1], self.sequences[3]], list(result))

Esempio n. 5

File: test_transform.py Progetto: yimsea/seqmagick

 def test_all_pass(self):
     result = list(transform.min_ungap_length_discard(self.sequences, 0))
     self.assertEqual(self.sequences, result)

Esempio n. 6

File: test_transform.py Progetto: yimsea/seqmagick

 def test_none_pass(self):
     result = list(transform.min_ungap_length_discard(self.sequences, 8))
     self.assertEqual([], result)

Esempio n. 7

File: test_transform.py Progetto: fhcrc/seqmagick

 def test_partial(self):
     result = transform.min_ungap_length_discard(self.sequences, 4)
     self.assertEqual(
         [self.sequences[1].seq, self.sequences[3].seq],
         [seq.seq for seq in result])

Esempio n. 8

File: test_transform.py Progetto: peterjc/seqmagick

 def test_partial(self):
     result = transform.min_ungap_length_discard(self.sequences, 4)
     self.assertEqual([self.sequences[1].seq, self.sequences[3].seq],
                      [seq.seq for seq in result])