def build(self):
"""Template method for building the repr"""
self._lines = ElasticLines()
self._process_header()
self._process_metadata()
self._process_positional_metadata()
self._process_stats()
self._process_data()
return self._lines.to_str()
def _build_repr(self, include_name):
lines = ElasticLines()
if include_name:
name_line = self.__class__.__name__
if len(self.name) > 0:
name_line += ' (%s)' % self.name
lines.add_line(name_line)
lines.add_separator()
lines.add_line(' AAs = %s' % str(self._amino_acids))
lines.add_line('Starts = %s' % str(self._starts))
base1 = 'U' * 16 + 'C' * 16 + 'A' * 16 + 'G' * 16
lines.add_line('Base1 = %s' % base1)
base2 = ('U' * 4 + 'C' * 4 + 'A' * 4 + 'G' * 4) * 4
lines.add_line('Base2 = %s' % base2)
base3 = 'UCAG' * 16
lines.add_line('Base3 = %s' % base3)
return lines.to_str()
def test_add_lines(self):
self.el = ElasticLines()
self.el.add_lines(['alice', 'bob', 'carol'])
self.assertEqual(self.el.to_str(), 'alice\nbob\ncarol')
def setUp(self):
self.el = ElasticLines()