def main(): parser = argparse.ArgumentParser(description=DESCRIPTION, epilog=EPILOG, formatter_class=ParagraphFormatter) utils.add_db_arguments(parser) utils.add_tokenizer_argument(parser) utils.add_query_arguments(parser) parser.add_argument('parent', help=PARENT_LABEL_HELP, metavar='PARENT_LABEL') parser.add_argument('child', help=CHILD_LABEL_HELP, metavar='CHILD_LABEL') parser.add_argument('unrelated', help=UNRELATED_LABEL_HELP, metavar='UNRELATED_LABEL') parser.add_argument('max_works', help=MAX_WORKS_HELP, metavar='MAXIMUM', type=int) parser.add_argument('output_dir', help=OUTPUT_DIR_HELP, metavar='DIRECTORY') args = parser.parse_args() catalogue = utils.get_catalogue(args) data_store = utils.get_data_store(args) tokenizer = utils.get_tokenizer(args) try: test = taclextra.paternity.PaternityTest(data_store, catalogue, tokenizer, args.parent, args.child, args.unrelated, args.max_works, args.output_dir) test.process() except Exception as e: parser.error(e)
def generate_supplied_diff_subparser(subparsers): """Adds a sub-command parser to `subparsers` to run a diff query using the supplied results sets.""" parser = subparsers.add_parser( 'sdiff', description=constants.SUPPLIED_DIFF_DESCRIPTION, epilog=constants.SUPPLIED_DIFF_EPILOG, formatter_class=ParagraphFormatter, help=constants.SUPPLIED_DIFF_HELP) parser.set_defaults(func=supplied_diff) utils.add_common_arguments(parser) utils.add_tokenizer_argument(parser) utils.add_db_arguments(parser, True) utils.add_supplied_query_arguments(parser)
def generate_supplied_diff_subparser(subparsers): """Adds a sub-command parser to `subparsers` to run a diff query using the supplied results sets.""" parser = subparsers.add_parser( 'sdiff', description=constants.SUPPLIED_DIFF_DESCRIPTION, epilog=constants.SUPPLIED_DIFF_EPILOG, formatter_class=ParagraphFormatter, help=constants.SUPPLIED_DIFF_HELP) parser.set_defaults(func=supplied_diff) utils.add_common_arguments(parser) utils.add_tokenizer_argument(parser) utils.add_db_arguments(parser, True) utils.add_supplied_query_arguments(parser)
def main(): parser = argparse.ArgumentParser(description=DESCRIPTION) utils.add_db_arguments(parser) utils.add_tokenizer_argument(parser) utils.add_query_arguments(parser) parser.add_argument('output', help=HELP_OUTPUT, metavar='DIRECTORY') args = parser.parse_args() data_store = utils.get_data_store(args) catalogue = utils.get_catalogue(args) tokenizer = utils.get_tokenizer(args) output_dir = os.path.abspath(args.output) reporter = lifetime.LifetimeReporter(data_store, catalogue, tokenizer, output_dir) reporter.process()
def generate_normalise_subparser(subparsers): """Adds a sub-command parser to `subparsers` to generate a normalised corpus from an unnormalised corpus.""" parser = subparsers.add_parser( 'normalise', description=constants.NORMALISE_DESCRIPTION, epilog=constants.NORMALISE_EPILOG, formatter_class=ParagraphFormatter, help=constants.NORMALISE_HELP) parser.set_defaults(func=normalise_corpus) utils.add_tokenizer_argument(parser) utils.add_common_arguments(parser) parser.add_argument('corpus', help=constants.NORMALISE_CORPUS_HELP, metavar='CORPUS') parser.add_argument('mapping', help=constants.NORMALISE_MAPPING_HELP, metavar='MAPPING') parser.add_argument('output', help=constants.NORMALISE_OUTPUT_HELP, metavar='OUTPUT')
def generate_lifetime_subparser(subparsers): """Adds a sub-command parser to `subparsers` to make a lifetime report.""" parser = subparsers.add_parser( 'lifetime', description=constants.LIFETIME_DESCRIPTION, epilog=constants.LIFETIME_EPILOG, formatter_class=ParagraphFormatter, help=constants.LIFETIME_HELP) parser.set_defaults(func=lifetime_report) utils.add_tokenizer_argument(parser) utils.add_common_arguments(parser) utils.add_query_arguments(parser) parser.add_argument('results', help=constants.LIFETIME_RESULTS_HELP, metavar='RESULTS') parser.add_argument('label', help=constants.LIFETIME_LABEL_HELP, metavar='LABEL') parser.add_argument('output', help=constants.REPORT_OUTPUT_HELP, metavar='OUTPUT')
def generate_normalise_subparser(subparsers): """Adds a sub-command parser to `subparsers` to generate a normalised corpus from an unnormalised corpus.""" parser = subparsers.add_parser('normalise', description=constants.NORMALISE_DESCRIPTION, epilog=constants.NORMALISE_EPILOG, formatter_class=ParagraphFormatter, help=constants.NORMALISE_HELP) parser.set_defaults(func=normalise_corpus) utils.add_tokenizer_argument(parser) utils.add_common_arguments(parser) parser.add_argument('corpus', help=constants.NORMALISE_CORPUS_HELP, metavar='CORPUS') parser.add_argument('mapping', help=constants.NORMALISE_MAPPING_HELP, metavar='MAPPING') parser.add_argument('output', help=constants.NORMALISE_OUTPUT_HELP, metavar='OUTPUT')
def generate_lifetime_subparser(subparsers): """Adds a sub-command parser to `subparsers` to make a lifetime report.""" parser = subparsers.add_parser('lifetime', description=constants.LIFETIME_DESCRIPTION, epilog=constants.LIFETIME_EPILOG, formatter_class=ParagraphFormatter, help=constants.LIFETIME_HELP) parser.set_defaults(func=lifetime_report) utils.add_tokenizer_argument(parser) utils.add_common_arguments(parser) utils.add_query_arguments(parser) parser.add_argument('results', help=constants.LIFETIME_RESULTS_HELP, metavar='RESULTS') parser.add_argument('label', help=constants.LIFETIME_LABEL_HELP, metavar='LABEL') parser.add_argument('output', help=constants.REPORT_OUTPUT_HELP, metavar='OUTPUT')
def generate_results_subparser(subparsers): """Adds a sub-command parser to `subparsers` to manipulate CSV results data.""" parser = subparsers.add_parser( 'results', description=constants.RESULTS_DESCRIPTION, epilog=constants.RESULTS_EPILOG, formatter_class=ParagraphFormatter, help=constants.RESULTS_HELP) utils.add_common_arguments(parser) parser.set_defaults(func=results) be_group = parser.add_argument_group('bifurcated extend') be_group.add_argument('-b', '--bifurcated-extend', dest='bifurcated_extend', metavar='CORPUS', help=constants.RESULTS_BIFURCATED_EXTEND_HELP) be_group.add_argument('--max-be-count', dest='bifurcated_extend_size', help=constants.RESULTS_BIFURCATED_EXTEND_MAX_HELP, metavar='COUNT', type=int) normalise_group = parser.add_argument_group('denormalise') normalise_group.add_argument( '--denormalise', dest='denormalise_mapping', help=constants.RESULTS_DENORMALISE_MAPPING_HELP, metavar='MAPPING') normalise_group.add_argument( '--denormalised-corpus', dest='denormalised_corpus', help=constants.RESULTS_DENORMALISE_CORPUS_HELP, metavar='CORPUS') parser.add_argument('-e', '--extend', dest='extend', help=constants.RESULTS_EXTEND_HELP, metavar='CORPUS') parser.add_argument('--excise', help=constants.RESULTS_EXCISE_HELP, metavar='NGRAM', type=str) parser.add_argument('-l', '--label', dest='label', help=constants.RESULTS_LABEL_HELP, metavar='LABEL') parser.add_argument('--min-count', dest='min_count', help=constants.RESULTS_MINIMUM_COUNT_HELP, metavar='COUNT', type=int) parser.add_argument('--max-count', dest='max_count', help=constants.RESULTS_MAXIMUM_COUNT_HELP, metavar='COUNT', type=int) parser.add_argument('--min-count-work', dest='min_count_work', help=constants.RESULTS_MINIMUM_COUNT_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--max-count-work', dest='max_count_work', help=constants.RESULTS_MAXIMUM_COUNT_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--min-size', dest='min_size', help=constants.RESULTS_MINIMUM_SIZE_HELP, metavar='SIZE', type=int) parser.add_argument('--max-size', dest='max_size', help=constants.RESULTS_MAXIMUM_SIZE_HELP, metavar='SIZE', type=int) parser.add_argument('--min-works', dest='min_works', help=constants.RESULTS_MINIMUM_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--max-works', dest='max_works', help=constants.RESULTS_MAXIMUM_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--ngrams', dest='ngrams', help=constants.RESULTS_NGRAMS_HELP, metavar='NGRAMS') parser.add_argument('--reciprocal', action='store_true', help=constants.RESULTS_RECIPROCAL_HELP) parser.add_argument('--reduce', action='store_true', help=constants.RESULTS_REDUCE_HELP) parser.add_argument('--relabel', help=constants.RESULTS_RELABEL_HELP, metavar='CATALOGUE') parser.add_argument('--remove', help=constants.RESULTS_REMOVE_HELP, metavar='LABEL', type=str) parser.add_argument('--sort', action='store_true', help=constants.RESULTS_SORT_HELP) utils.add_tokenizer_argument(parser) parser.add_argument('-z', '--zero-fill', dest='zero_fill', help=constants.RESULTS_ZERO_FILL_HELP, metavar='CORPUS') parser.add_argument('results', help=constants.RESULTS_RESULTS_HELP, metavar='RESULTS') unsafe_group = parser.add_argument_group( constants.RESULTS_UNSAFE_GROUP_TITLE, constants.RESULTS_UNSAFE_GROUP_DESCRIPTION) unsafe_group.add_argument('--add-label-count', action='store_true', help=constants.RESULTS_ADD_LABEL_COUNT_HELP) unsafe_group.add_argument('--add-label-work-count', action='store_true', help=constants.RESULTS_ADD_LABEL_WORK_COUNT_HELP) unsafe_group.add_argument('--collapse-witnesses', action='store_true', help=constants.RESULTS_COLLAPSE_WITNESSES_HELP) unsafe_group.add_argument('--group-by-ngram', dest='group_by_ngram', help=constants.RESULTS_GROUP_BY_NGRAM_HELP, metavar='CATALOGUE') unsafe_group.add_argument('--group-by-witness', action='store_true', help=constants.RESULTS_GROUP_BY_WITNESS_HELP)
def generate_results_subparser(subparsers): """Adds a sub-command parser to `subparsers` to manipulate CSV results data.""" parser = subparsers.add_parser('results', description=constants.RESULTS_DESCRIPTION, epilog=constants.RESULTS_EPILOG, formatter_class=ParagraphFormatter, help=constants.RESULTS_HELP) utils.add_common_arguments(parser) parser.set_defaults(func=results) be_group = parser.add_argument_group('bifurcated extend') be_group.add_argument('-b', '--bifurcated-extend', dest='bifurcated_extend', metavar='CORPUS', help=constants.RESULTS_BIFURCATED_EXTEND_HELP) be_group.add_argument('--max-be-count', dest='bifurcated_extend_size', help=constants.RESULTS_BIFURCATED_EXTEND_MAX_HELP, metavar='COUNT', type=int) normalise_group = parser.add_argument_group('denormalise') normalise_group.add_argument( '--denormalise', dest='denormalise_mapping', help=constants.RESULTS_DENORMALISE_MAPPING_HELP, metavar='MAPPING') normalise_group.add_argument( '--denormalised-corpus', dest='denormalised_corpus', help=constants.RESULTS_DENORMALISE_CORPUS_HELP, metavar='CORPUS') parser.add_argument('-e', '--extend', dest='extend', help=constants.RESULTS_EXTEND_HELP, metavar='CORPUS') parser.add_argument('--excise', help=constants.RESULTS_EXCISE_HELP, metavar='NGRAM', type=str) parser.add_argument('-l', '--label', dest='label', help=constants.RESULTS_LABEL_HELP, metavar='LABEL') parser.add_argument('--min-count', dest='min_count', help=constants.RESULTS_MINIMUM_COUNT_HELP, metavar='COUNT', type=int) parser.add_argument('--max-count', dest='max_count', help=constants.RESULTS_MAXIMUM_COUNT_HELP, metavar='COUNT', type=int) parser.add_argument('--min-count-work', dest='min_count_work', help=constants.RESULTS_MINIMUM_COUNT_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--max-count-work', dest='max_count_work', help=constants.RESULTS_MAXIMUM_COUNT_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--min-size', dest='min_size', help=constants.RESULTS_MINIMUM_SIZE_HELP, metavar='SIZE', type=int) parser.add_argument('--max-size', dest='max_size', help=constants.RESULTS_MAXIMUM_SIZE_HELP, metavar='SIZE', type=int) parser.add_argument('--min-works', dest='min_works', help=constants.RESULTS_MINIMUM_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--max-works', dest='max_works', help=constants.RESULTS_MAXIMUM_WORK_HELP, metavar='COUNT', type=int) parser.add_argument('--ngrams', dest='ngrams', help=constants.RESULTS_NGRAMS_HELP, metavar='NGRAMS') parser.add_argument('--reciprocal', action='store_true', help=constants.RESULTS_RECIPROCAL_HELP) parser.add_argument('--reduce', action='store_true', help=constants.RESULTS_REDUCE_HELP) parser.add_argument('--relabel', help=constants.RESULTS_RELABEL_HELP, metavar='CATALOGUE') parser.add_argument('--remove', help=constants.RESULTS_REMOVE_HELP, metavar='LABEL', type=str) parser.add_argument('--sort', action='store_true', help=constants.RESULTS_SORT_HELP) utils.add_tokenizer_argument(parser) parser.add_argument('-z', '--zero-fill', dest='zero_fill', help=constants.RESULTS_ZERO_FILL_HELP, metavar='CORPUS') parser.add_argument('results', help=constants.RESULTS_RESULTS_HELP, metavar='RESULTS') unsafe_group = parser.add_argument_group( constants.RESULTS_UNSAFE_GROUP_TITLE, constants.RESULTS_UNSAFE_GROUP_DESCRIPTION) unsafe_group.add_argument('--add-label-count', action='store_true', help=constants.RESULTS_ADD_LABEL_COUNT_HELP) unsafe_group.add_argument('--add-label-work-count', action='store_true', help=constants.RESULTS_ADD_LABEL_WORK_COUNT_HELP) unsafe_group.add_argument('--collapse-witnesses', action='store_true', help=constants.RESULTS_COLLAPSE_WITNESSES_HELP) unsafe_group.add_argument('--group-by-ngram', dest='group_by_ngram', help=constants.RESULTS_GROUP_BY_NGRAM_HELP, metavar='CATALOGUE') unsafe_group.add_argument('--group-by-witness', action='store_true', help=constants.RESULTS_GROUP_BY_WITNESS_HELP)