def test_no_event_one_overlap(self):
self.path1 = [str(self.ex1), str(self.ex2), str(self.ex3)]
self.path2 = [str(self.ex1), str(self.ex7), str(self.ex3)]
self.events = [self.path1, self.path2]
self.new_events = remove_overlaps(self.events, self.exonsDB)
self.assertEqual(len(self.new_events), 0)
def test_one_event_one_overlap(self):
self.path1 = [str(self.ex1), str(self.ex2), str(self.ex4)]
self.path2 = [str(self.ex1), str(self.ex7), str(self.ex4)]
self.path3 = [str(self.ex1), str(self.ex3), str(self.ex4)]
self.events = [self.path1, self.path2, self.path3]
self.new_events = remove_overlaps(self.events, self.exonsDB)
'''new_events with one path will be not included in the output'''
self.assertEqual(len(self.new_events) - 1, 0)
def test_no_events(self):
self.events = []
self.new_events = remove_overlaps(self.events, self.exonsDB)
self.assertEqual(len(self.new_events), 0)
