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fig_4_b_high_gaba_spike_raster.py
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fig_4_b_high_gaba_spike_raster.py
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# fig_4_b_high_gaba_spike_raster.py ---
#
# Filename: fig_4_b_high_gaba_spike_raster.py
# Description:
# Author: subha
# Maintainer:
# Created: Sat Jan 2 17:29:30 2016 (-0500)
# Version:
# Last-Updated: Sun Jan 10 15:54:19 2016 (-0500)
# By: subha
# Update #: 6
# URL:
# Keywords:
# Compatibility:
#
#
# Commentary:
#
#
#
#
# Change log:
#
#
#
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License as
# published by the Free Software Foundation; either version 3, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
# General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; see the file COPYING. If not, write to
# the Free Software Foundation, Inc., 51 Franklin Street, Fifth
# Floor, Boston, MA 02110-1301, USA.
#
#
# Code:
import os
import sys
import numpy as np
from matplotlib import pyplot as plt
from util import makepath
from config import cellcolor, mdict
from plotutil import plot_spike_raster
from traubdata import TraubData, cellcount_tuple
from matplotlib import rc
rc('font', size=12)
rc('figure', figsize=(3, 4))
if __name__ == '__main__':
datafile = 'data_20141026_001859_109751_compute-0-15.local.h5' # 1.2x
figfilename='figures/Figure_4B_spike_raster_high_GABA.png'
fig, ax = plot_spike_raster(makepath(datafile), (5, 8))
# fig.tight_layout()
fig.savefig(figfilename, transparent=True)
print 'Saved figure in %s' % (figfilename)
plt.show()
#
# fig_4_b_high_gaba_spike_raster.py ends here