Skip to content

Hrishi27/Candidate_Script

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

7 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Candidate_Script

The candidate script is an annoation program that allows a user to analyse variants in a pedigree based upon a particular inheritance mode. The user can use different inheritance modes to run the script, control results by providing various thresholds in the configuration file. For now, the variant inforamtion is given through a mergedVCF file but in future this information could be given through the impala database system Current Annotation include: Kavair, CMS, UCSC_known_genes, CADD, Clinvar and SNPEff(depending upon availability on Impala)

About

No description, website, or topics provided.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages