Get a local installation of Rfam website using Docker and the public Rfam MySQL database.
Clone this repository, then start docker:
docker-compose up
The Rfam site should be available at http://0.0.0.0:3000.
By default the website connects to the public Rfam database but an alternative
database can be specified in config/rfamweb_local.conf (ignored by git).
# list running docker containers
docker ps
# login to running container from another terminal
docker exec -it rfamweb bash
# login to running container
perl PfamScripts/wiki/sync_articles_cron.pl -c RfamWeb/config/wiki.conf
perl PfamScripts/wiki/update_cron.pl -c RfamWeb/config/wiki.conf
perl PfamScripts/wiki/scrape_cron.pl -c RfamWeb/config/wiki.conf
Examples: