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one-shot-sampling

Simulation code for one-shot sampling paper

These scripts are used to generate the main simulation figures in the bioRxiv paper titled "Time series experimental design under one-shot sampling: The importance of condition diversity".

  • plot_plos_one_fig_4() in mle_on_glm.py generates Fig. 4. The estimated wall time is 240 hours.
  • plot_plos_one_fig_5_6() in bslr.py generates Figs. 5 and 6. The estimated wall time is 160 hours.
  • plot_plos_one_fig_7() in bslr.py generates Fig. 7. The estimated wall time is 2 hours.
  • gen_plos_one_table_2() in bslr.py generates Table 2. The estimated wall time is 280 hours.

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Simulation code for one-shot sampling paper

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