Neale Lab Scripts

Python modules written to aid with annotation of the loblolly pine genome. Includes code for quick parsing (FileIO, classes, etc), program wrappers (SGEWrapper, hmmern, etc), and novel tools (TupleMerger, bitwiseSeq, etc).

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Name		Name	Last commit message	Last commit date
Latest commit History 185 Commits
Programs		Programs
Tests		Tests
FileIO.py		FileIO.py
GCclassif.py		GCclassif.py
README.md		README.md
RMStats.py		RMStats.py
SGEWrapper.py		SGEWrapper.py
SSRInterspersedDiffStats.py		SSRInterspersedDiffStats.py
TupleMerger.py		TupleMerger.py
annotReplacer.py		annotReplacer.py
bitwiseSeq.py		bitwiseSeq.py
classes.py		classes.py
getPslFileRepeatStats.py		getPslFileRepeatStats.py
hmmern.py		hmmern.py
isolateSequence.py		isolateSequence.py
pickler.py		pickler.py
repeat.py		repeat.py
statParser.py		statParser.py
tabify.py		tabify.py
timestamp.py		timestamp.py
trfStats.py		trfStats.py

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