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Dash Bio

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🚧 Work-in-Progress 🏗️

Open-source bioinformatics components for Dash

Demo: https://dash-gallery.plotly.host/dash-bio

Progress

Bioinformatics charts

  • Dash Circos
  • Dash Clustergram
  • Dash Phylocanvas
  • Dash Cytoscape
  • Dash Oncoprint
  • Dash Needle
  • Dash Manhattan
  • Dash Volcano

Sequence analysis tools

  • Dash neXtProt Sequence Viewer
  • Dash Multiple Sequence Alignment
  • Dash Track Viewer
  • Dash Ideogram
Molecular and structural bioinformatics visualization
  • Dash MolJS
  • Dash Speck

About

Go to this link to learn about Dash. Go to this link to learn about Dash Bio.

Getting started

  1. Set up your Python environment:
    # Create a virtualenv
    $ python3 -m venv venv
    # Activate the virtualenv
    $ . venv/bin/activate
    # (On Windows, the above would be: venv\scripts\activate)
    # Install the dev dependencies
    $ pip install -r requirements.txt
  2. Run python index.py
  3. Visit http://localhost:8050 in your web browser and click on the component you want to explore.

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Open-source bioinformatics components for Dash

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  • Python 78.8%
  • JavaScript 15.8%
  • CSS 5.4%