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Python implementation of the Constrained Non-negative Matrix Factorization algorithm for source extraction from calcium imaging recordings

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Python translation of Constrained Non-negative Matrix Factorzation algorithm for source extraction from calcium imaging data. This project aims at providing a Python version of the code implemented in https://github.com/epnev and detailed in

Pnevmatikakis, Eftychios A., et al. "A structured matrix factorization framework for large scale calcium imaging data analysis." arXiv preprint arXiv:1409.2903 (2014).

Contributors: Eftychios Pnevmatikakis Andrea Giovannucci

Important Note

The code is currently under development. Please do not use as long as this message appears.

License

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.

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Python implementation of the Constrained Non-negative Matrix Factorization algorithm for source extraction from calcium imaging recordings

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