gcfntnu / gcfdb Public

Snakemake rules for downloading data from external sources

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Name		Name	Last commit message	Last commit date
Latest commit History 169 Commits
common		common
scripts		scripts
.gitignore		.gitignore
10xgenomics.config		10xgenomics.config
10xgenomics.db		10xgenomics.db
JGI.db		JGI.db
README.md		README.md
contaminants.db		contaminants.db
convert.rules		convert.rules
emvec.db		emvec.db
ensembl.config		ensembl.config
ensembl.db		ensembl.db
ercc.db		ercc.db
frnadb.db		frnadb.db
gencode.config		gencode.config
gencode.db		gencode.db
greengenes.db		greengenes.db
gtrnadb.db		gtrnadb.db
illumina.db		illumina.db
indexes.rules		indexes.rules
libprep.config		libprep.config
lincipedia.db		lincipedia.db
lncbook.config		lncbook.config
lncbook.db		lncbook.db
mirbase.config		mirbase.config
mirbase.db		mirbase.db
mircarta.config		mircarta.config
mircarta.db		mircarta.db
mirge.db		mirge.db
ncbi.db		ncbi.db
pirna.db		pirna.db
pyscenic.db		pyscenic.db
qiime2_classifiers.rules		qiime2_classifiers.rules
quickmirseq.db		quickmirseq.db
reference_db.db		reference_db.db
rnacentral.config		rnacentral.config
rnacentral.db		rnacentral.db
rrna.db		rrna.db
silva.db		silva.db
smallrna_calibrators.db		smallrna_calibrators.db
sortmerna.config		sortmerna.config
sortmerna.db		sortmerna.db
spikein.db		spikein.db
trna_explorer.db		trna_explorer.db
ucsc.db		ucsc.db
unitas.db		unitas.db
unite.db		unite.db
univec.db		univec.db