randomwalk

Reconstruct a graph using first hits from a random walk on the graph

/docs contains descriptions of the functions in the rw package
/exp contains the experiment itself and some data parsing files
/random is random files
/rw is the core Python package which contains functions used to reconstruct graphs
/toydata is some data generated from toy networks
/semanticnetwork is the animal semantic network from Abbott, Austerweil et al. project

Name		Name	Last commit message	Last commit date
Latest commit History 93 Commits
ExGUtils-1.0		ExGUtils-1.0
docs		docs
exp		exp
graphs		graphs
human_graphs		human_graphs
invite-code-jeff		invite-code-jeff
latex		latex
old_results		old_results
random		random
rw		rw
semanticnetwork		semanticnetwork
sims		sims
.gitignore		.gitignore
.jun.py.swo		.jun.py.swo
.main.py.swo		.main.py.swo
.toy_sims.py.swo		.toy_sims.py.swo
.toys_sim.py.swo		.toys_sim.py.swo
55nodes.csv		55nodes.csv
55nodes_numx.png		55nodes_numx.png
BEAGLEdata.mat		BEAGLEdata.mat
README.md		README.md
S101_invite.dot		S101_invite.dot
S101_rw.dot		S101_rw.dot
S105.csv		S105.csv
S105.dot		S105.dot
Screenshot 2015-11-04 12.19.33.png		Screenshot 2015-11-04 12.19.33.png
addBeagle.r		addBeagle.r
animals_1500.csv		animals_1500.csv
benchmark.cprof		benchmark.cprof
benchmark.cprof.log		benchmark.cprof.log
benchmark.csv		benchmark.csv
extract_edges.py		extract_edges.py
human.py		human.py
human_sims.py		human_sims.py
installegg.sh		installegg.sh
jeff5.txt		jeff5.txt
jeff9.txt		jeff9.txt
machinelearning_lecture_semanticnetwork.pptx		machinelearning_lecture_semanticnetwork.pptx
main.bak		main.bak
predict_irts.py		predict_irts.py
prior.txt		prior.txt
regml.py		regml.py
sim_results5_15nodes_3numx_2.csv		sim_results5_15nodes_3numx_2.csv
sim_results5_55nodes.csv		sim_results5_55nodes.csv
sim_results9_55nodes.csv		sim_results9_55nodes.csv
sim_results9_55nodes_3numx.csv		sim_results9_55nodes_3numx.csv
sim_results_1.csv		sim_results_1.csv
sim_results_benchmark.csv		sim_results_benchmark.csv
sims.Rmd		sims.Rmd
sims.pdf		sims.pdf
to_compare.sh		to_compare.sh
todo.docx		todo.docx
toy.py		toy.py
toy_sims.py		toy_sims.py
toy_sims.pyc		toy_sims.pyc
toyparams.py		toyparams.py
vegetables_1500.csv		vegetables_1500.csv

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