Belinda E. Medlyn, Martin G. De Kauwe, Yan-Shih Lin, Jürgen Knauer, Remko A. Duursma, Christopher A. Williams, Almut Arneth, Rob Clement, Peter Isaac, Jean-Marc Limousin, Maj-Lena Linderson, Patrick Meir, Nicolas Martin-StPaul and Lisa Wingate.
Repository containing all the code associated with our paper.
- Leaf gas exchange data is from Lin et al. (2015) Optimal stomatal behaviour around the world. Nature Climate Change, 5, 459–464.
- Stable isotope dataset: Dryad Digital Repository
- Eddy covariance dataset: FLUXNET
- Elevation data: GTOPO30
- NACP Synergetic (SYNMAP) C4 relative fraction: Jung, M., Henkel, K., Herold, M., and Churkina, G.: Exploiting synergies of global land cover products for carbon cycle modeling. Remote Sens. Environ., 101, 534–553, doi:10.1016/j.rse.2006.01.020, 2006..
- Global CO2 data: Ed Dlugokencky and Pieter Tans, NOAA/ESRL
To generate all g1 fits from leaf, isotope and fluxnet data and manuscript figures, simple type:
$ make
You will need a few python packages, namely numpy
, pandas
, matplotlib
scipy
and lmfit
. The fitting code also exploits the python MPI library multiprocessing
to speed things up. The R code depends on the doby
, multcomp
, lme4
and LMERConvenienceFunctions
packages.
- Belinda Medlyn: B.Medlyn at westernsydney.edu.au
- Martin De Kauwe: mdekauwe at gmail.com