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Repository containing all the code to reproduce the results in Medlyn et al. (2017) How do leaf and ecosystem measures of water-use efficiency compare? New Phytologist, in press.

mdekauwe/g1_leaf_canopy_ecosystem

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How do leaf and ecosystem measures of water-use efficiency compare?

Belinda E. Medlyn, Martin G. De Kauwe, Yan-Shih Lin, Jürgen Knauer, Remko A. Duursma, Christopher A. Williams, Almut Arneth, Rob Clement, Peter Isaac, Jean-Marc Limousin, Maj-Lena Linderson, Patrick Meir, Nicolas Martin-StPaul and Lisa Wingate.

Overview

Repository containing all the code associated with our paper.

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Instructions

To generate all g1 fits from leaf, isotope and fluxnet data and manuscript figures, simple type:

$ make

Dependancies

You will need a few python packages, namely numpy, pandas, matplotlib scipy and lmfit. The fitting code also exploits the python MPI library multiprocessing to speed things up. The R code depends on the doby, multcomp, lme4 and LMERConvenienceFunctions packages.

Contacts

  • Belinda Medlyn: B.Medlyn at westernsydney.edu.au
  • Martin De Kauwe: mdekauwe at gmail.com

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Repository containing all the code to reproduce the results in Medlyn et al. (2017) How do leaf and ecosystem measures of water-use efficiency compare? New Phytologist, in press.

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